Job Description P30855 Confidence 97.58% Date Thu Jan 5 11:46:34 GMT 2012 Rank 310 Aligned Residues 213 % Identity 13% Template d1sw5a_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.80

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		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.																											.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																								.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	N	A	D	Y	L	N	L	L	K	R	A	L	N	I	K	L	T	L	R	E	Y	.	A	D	H	Q	K	A	M	D	A	L	A	E	G	E	V	D	I	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	H	L	V	T	S	P	P	L	N	N	D
Query Conservation																								.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	L	A	N	M	I	A	I	L	L	E	E	N	G	Y	K	A	E	V	K	E	G	L	G	G	T	L	V	N	Y	E	A	L	K	R	N	D	I	Q	L	Y	V	E	Y	T	G	T	A	Y	N	V	I	L	R	K	Q	P	P	E	L	W	D	Q	Q	Y	I	F	D	E	V	K	K	G	L	L	E	A	D	G	V
Template Known Secondary structure														T	T							T	T			S											T	S	S	S												T	T	S						S	S
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.					.	.	.	.	.	.	160	.	.	.	.	.					.	.	.	.	170	.						.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																					.	.	.	.													.	.	.	.							.	.	.	.	.
Query SS confidence																					.	.	.	.													.	.	.	.							.	.	.	.	.
Query Sequence		I	A	A	T	K	P	L	I	I	T	F	P	A	L	V	T	T	L	H	.	.	.	.	D	S	M	R	P	L	T	S	P	K	P	V	.	.	.	.	N	I	A	R	V	A	.	.	.	.	.	N	Y	P	P	D	E	V	I	H	Q	S	F	P	K	A	T	I	I	S	F	T	N	L	Y	Q	A	L	A	S	V
Query Conservation																					.	.	.	.													.	.	.	.							.	.	.	.	.
Alig confidence																					.	.	.	.													.	.	.	.							.	.	.	.	.
Template Conservation
Template Sequence		V	V	A	A	K	L	G	F	R	D	D	Y	A	L	A	V	R	A	D	W	A	E	E	N	G	V	E	K	I	S	D	L	A	E	F	A	D	Q	L	V	F	G	S	D	P	E	F	A	S	R	P	D	G	L	P	Q	I	K	K	V	Y	G	F	E	F	K	E	V	K	Q	M	E	P	T	L	M	Y	E	A	I
Template Known Secondary structure																										T			B	G	G	G	G	T	T	T	G	G	G												S	T	T	S									T				S							G	G	G
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.				.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.
Query SS confidence																																																	.	.	.
Query Sequence		S	A	G	H	N	D	Y	F	I	G	S	N	I	I	T	S	S	M	I	S	R	Y	F	T	H	S	L	N	V	V	K	Y	Y	N	S	P	R	Q	Y	N	F	F	L	T	R	K	E	.	.	.	S	V	I	L	N	E	V	L	N	R	F	V	D	A	L	T	N	E	V	R	Y	E	V	S	Q	N	W	L	D	T
Query Conservation																																																	.	.	.
Alig confidence															.	.																			.														.	.	.
Template Conservation															.	.																			.
Template Sequence		K	N	K	Q	V	D	V	I	P	A	Y	T	T	.	.	D	S	R	V	D	L	F	N	L	K	I	L	E	D	D	K	G	A	.	L	P	P	Y	D	A	I	I	I	V	N	G	N	T	A	K	D	E	K	L	I	S	V	L	K	L	L	E	D	R	I	D	T	D	T	M	R	A	L	N	Y	Q	Y	D	V	E
Template Known Secondary structure			T	T	S		S						T	T	.	.							T	T					B		T	T			.	S											T	T	G	G	G										T	T	T	T																T	S
Template Predicted Secondary structure															.	.																			.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.			.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	L	A	F	L	N	K	P	L	E	L	T	E	H	E	K	Q	W	I	K	Q	H	P	N	L	K
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.
Template Sequence		K	K	D	A	R	.	.	.	.	.	.	.	.	E	I	A	M	S	F	L	K	E	Q	G	L	V	K
Template Known Secondary structure							.	.	.	.	.	.	.	.											T	S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.
Template SS confidence
		257	.	.	260	.									.	.	.	.	.	.	.	.	270	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions