Job Description P30855 Confidence 99.88% Date Thu Jan 5 11:46:34 GMT 2012 Rank 84 Aligned Residues 222 % Identity 12% Template d1s50a1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.65

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.								.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.													.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	K	K	N	L	V	I	A	V	H	K	S	Q	T	A	T	L	L	H	T	D	S	Q	Q	R	.	.	.	.	.	.	.	V	R	G	I	N	A	D	Y	L	N	L	L	K	R	A	L	N	I	K	L	T	L	R	E	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	D	H	Q	K	A	M	D	A	L	A
Query Conservation																											.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.															.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.
Template Sequence		S	N	R	S	L	I	V	T	T	.	.	I	L	E	E	P	Y	V	L	F	K	K	S	D	K	P	L	Y	G	N	D	R	F	E	G	Y	C	I	D	L	L	R	E	L	S	T	I	L	G	F	T	Y	E	I	R	L	V	E	D	G	K	Y	G	A	Q	D	D	V	N	G	Q	W	N	G	M	V	R	E	L	I
Template Known Secondary structure											.	.			B	T	T	T	B						S	S				G	G	G	G			S														T									T	T						B		T	T	T			B
Template Predicted Secondary structure											.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10			.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure																																														.																												.	.	.	.	.	.	.	.
Query SS confidence																																														.																												.	.	.	.	.	.	.	.
Query Sequence		E	G	E	V	D	I	V	L	S	H	L	V	T	S	P	P	L	N	N	D	I	A	A	T	K	P	L	I	I	T	F	P	A	L	V	T	T	L	H	D	S	M	R	P	.	L	T	S	P	K	P	V	N	I	A	R	V	A	N	Y	P	P	D	E	V	I	H	Q	S	F	P	K	.	.	.	.	.	.	.	.
Query Conservation																																														.																												.	.	.	.	.	.	.	.
Alig confidence																																														.																												.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	H	K	A	D	L	A	V	A	P	L	A	I	T	Y	V	R	E	K	V	I	D	F	S	K	P	F	M	T	L	G	I	S	I	L	Y	R	K	P	I	D	S	A	D	D	L	A	K	Q	T	K	I	E	Y	G	A	V	E	D	G	A	T	M	T	F	F	K	K	S	K	I	S	T	Y	D	K	M	W	A	F
Template Known Secondary structure		T	T	S		S				S	S		B							T	T					S		S															S						T		S	S	S					B	T	T	S											S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
						186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	A	T	I	I	S	F	T	N	L	Y	Q	A	L	A	S	V	S	A	G	H	N	D	Y	F	I	G	S	N	I	I	T	S	S	M	I	S	R	Y	F	T	H	S	L	N	V	V	K	Y	Y	N	S	P	R	Q	Y	N	F	F	L	T	R	K	E	S	V	I	L	N	E	V	L	N	R	F	V	D
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.																					.																			.	.	.																								.
Template Conservation																										.																			.	.	.																								.
Template Sequence		M	S	S	R	R	Q	S	V	L	V	K	S	N	E	E	G	I	Q	R	V	L	T	S	D	.	Y	A	F	L	M	E	S	T	T	I	E	F	V	T	Q	R	N	C	.	.	.	N	L	T	Q	I	G	G	L	I	D	S	K	G	Y	G	V	G	T	P	M	G	S	P	.	Y	R	D	K	I	T	I	A	I	L
Template Known Secondary structure					T					S	B	S	S											S	S	.															T	T		T	.	.	.	T					S	S		S	S										T	T		T	.
Template Predicted Secondary structure																										.																			.	.	.																								.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.				.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.
		262	.		.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		A	L	.	T	N	E	V	R	Y	E	V	S	Q	N	W	L	D	T	G	N	L	A
Query Conservation				.
Alig confidence				.
Template Conservation
Template Sequence		Q	L	Q	E	E	G	K	L	H	M	M	K	E	K	W	W	R	G	N	G	C	P
Template Known Secondary structure						T	T															S
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions