Job Description P30855 Confidence 97.65% Date Thu Jan 5 11:46:34 GMT 2012 Rank 305 Aligned Residues 212 % Identity 10% Template d1r9la_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.59

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		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.									.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.
Query Sequence		I	N	A	D	Y	L	N	L	L	K	R	A	L	N	I	K	L	T	L	R	E	Y	A	D	H	Q	K	A	M	D	A	L	A	E	G	E	V	D	I	V	L	S	H	L	V	T	S	P	P	L	.	.	.	.	.	.	.	.	N	N	D	I	A	A	T	K	P	L	I	I	T	F	P	A	L	V	T	T	L	H
Query Conservation																																																				.	.	.	.	.	.	.	.
Alig confidence																																																				.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	Q	T	L	L	V	S	R	A	L	E	K	L	G	Y	T	V	N	K	P	S	E	V	D	Y	N	V	G	Y	T	S	L	A	S	G	D	A	T	F	T	A	V	N	W	T	P	L	H	D	N	M	Y	E	A	A	G	G	D	K	K	F	Y	R	E	G	V	F	V	N	G	A	A	Q	G	Y	L	I	D	K	K
Template Known Secondary structure														T	T																					T	S	S									T	T	T							T	T	G	G	G	T					S		S
Template Predicted Secondary structure
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		154					.	.	.	.	.	160	.	.																.	.	.	.	.	.	.	170	.	.	.	.	.	.	.					.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.						.	200	.	.	.	.	.
Predicted Secondary structure			.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.																						.	.	.	.	.
Query SS confidence			.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.																						.	.	.	.	.
Query Sequence		D	.	.	.	.	S	M	R	P	L	T	S	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	P	V	N	I	A	R	V	A	N	Y	P	P	D	E	.	.	.	.	V	I	H	Q	S	F	P	K	A	T	I	I	S	F	T	N	L	Y	Q	A	L	.	.	.	.	.	A	S	V	S	A	G	H
Query Conservation			.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.																						.	.	.	.	.
Alig confidence			.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.																						.	.	.	.	.
Template Conservation
Template Sequence		T	A	D	Q	Y	K	I	T	N	I	A	Q	L	K	D	P	K	I	A	K	L	F	D	T	N	G	D	G	K	A	D	L	T	G	C	N	P	G	W	G	C	E	G	A	I	N	H	Q	L	A	A	Y	E	L	T	N	T	V	T	H	N	Q	G	N	Y	A	A	M	M	A	D	T	I	S	R	Y	K	E	G	K
Template Known Secondary structure							T			B	G	G	G	G	G	S					G	G	G		S	S	S	S	S	S								T	T	S													T	T		T	T	T						S															T	T
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.																					.	.	.	.	.	240	.	.	.	.	.	.					.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure																				.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Query SS confidence																				.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Query Sequence		N	D	Y	F	I	G	S	N	I	I	T	S	S	M	I	S	R	Y	.	F	T	H	S	L	N	V	V	K	Y	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	S	P	R	Q	Y	N	F	F	L	T	R	.	.	.	.	K	E	S	V	I	L	N	E	V	L	N	R	F	V
Query Conservation																				.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Alig confidence											.	.								.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.														.
Template Conservation											.	.																																																																					.
Template Sequence		P	V	F	Y	Y	T	W	T	P	.	.	Y	W	V	S	N	E	L	K	P	G	K	D	V	V	W	L	Q	V	P	F	S	A	L	P	G	D	K	N	A	D	T	K	L	P	N	G	A	N	Y	G	F	P	V	S	T	M	H	I	V	A	N	K	A	W	A	E	K	N	P	A	A	A	K	L	F	A	I	M	.
Template Known Secondary structure										S	.	.	S	S					S		B	T	T	T					B		S	S				T	T		T	T				B		T	T	S		B		S	S		S																										.
Template Predicted Secondary structure											.	.																																																																					.
Template SS confidence
		182	.	.	.	.	.	.	.	190			.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	L	T	N	E	V	R	Y	E	V	S	Q	N	W	L	D	T	G	N	L	A	F	L	N	K	P	L	E	L	T	E	H	E	K	Q	W	I	K	Q	H	P
Query Conservation
Alig confidence		.																										.	.	.	.	.
Template Conservation		.																										.	.	.	.	.
Template Sequence		.	Q	L	P	V	A	D	I	N	A	Q	N	A	I	M	H	D	G	K	A	S	E	G	D	I	Q	.	.	.	.	.	G	H	V	D	G	W	I	K	A	H	Q
Template Known Secondary structure		.																	T			S						.	.	.	.	.										T
Template Predicted Secondary structure		.																										.	.	.	.	.
Template SS confidence
			259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.						.	.	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions