Return to main results Retrieve Phyre Job Id

Job DescriptionP30855
Confidence83.38%DateThu Jan 5 11:46:34 GMT 2012
Rank422Aligned Residues79
% Identity14%Templated1jw1a2
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Transferrin
Resolution4.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   88.90.........100.........110.........120. ........130.........140.........
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Query Sequence  NLLKRALNIKLTLREYADHQKAMDALAEGEVDIV. . . . . . . . . . . . . . . . . . LSHLVTSPPLNNDIAATKPLIITFPALV
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Template Sequence  QQWSEQSGQNVTCATASTTDDCIALVLKGEADALSLDGGYIYTAGKCGLVPVMAENRKSSKHSSLDCVLRPTEGYLAVAV
Template Known Secondary structure  GGTTTTSSSS


SSSSSTTTTS

B

TSSSSSS





B

STTTTS
STTS




B
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   359360.........370.........380.........390.........400.........410.........420.........430........
 
   150.........160......
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Query Sequence  TTLHDSMRPLTSPKPVN
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Template Sequence  VKKANEGLTWNSLKGKK
Template Known Secondary structure 

TT
TT
SGGG
TTS
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   439440.........450.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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