Return to main results Retrieve Phyre Job Id

Job DescriptionP30855
Confidence65.35%DateThu Jan 5 11:46:34 GMT 2012
Rank482Aligned Residues61
% Identity23%Templated1j1na_
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   51...... ..60.........70.........80.........90.........100....... ..110........ .120.
Predicted Secondary structure 


.
















....



.
Query SS confidence 






.

















































. . . .










.


Query Sequence  WLASKKN. LVIAVHKSQTATLLHTDSQQRVRGINADYLNLLKRALNIKLTLREYADHQ. . . . KAMDALAEGEV. DIV
Query Conservation 

     .
 

    
 


      
   

  


  

  

   
      
 ....  
  
  


.


Alig confidence 






.
















..........






















....










.


Template Conservation       



 
              ..........       
  

 
         
   

    


  


 
Template Sequence  WVTDKPLTLKIHMHFRDKWVWDENW. . . . . . . . . . PVAKESFRLTNVKLQSVANKAATNSQEQFNLMMASGDLPDVV
Template Known Secondary structure 
S
SS
TTT

TTS..........S
S
TT


TSS


S
Template Predicted Secondary structure 











..........












Template SS confidence 












































































   5....10.........20......... 30.........40.........50.........60.........70.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions