Job Description P30855 Confidence 96.07% Date Thu Jan 5 11:46:34 GMT 2012 Rank 353 Aligned Residues 79 % Identity 18% Template d1ieja_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Transferrin Resolution 1.65

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.		.	140	.	.													.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																																			.				.					.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.				.					.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	N	L	L	K	R	A	L	N	I	K	L	T	L	R	E	Y	A	D	H	Q	K	A	M	D	A	L	A	E	G	E	V	D	I	V	L	S	H	L	V	T	S	P	P	L	N	N	D	I	.	A	A	T	.	K	P	L	I	.	.	.	.	.	.	.	.	.	.	.	.	I	T	F	P	A	L	V	T	T	L
Query Conservation																																																			.				.					.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.												.				.					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.
Template Sequence		L	R	D	L	T	Q	Q	E	R	I	S	L	T	C	V	Q	K	A	T	Y	L	D	C	I	K	A	I	A	N	N	E	A	D	A	I	T	.	.	L	D	G	G	Q	V	F	E	A	G	L	A	P	Y	K	L	K	P	I	A	A	E	V	Y	E	H	T	E	G	S	T	T	S	Y	Y	A	V	A	V	V	K	K
Template Known Secondary structure						T	T	T	S	S									S	S										T	T	S			B			.	.										T	S	T	T	T													S	S	S			S										T
Template Predicted Secondary structure																																						.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	D	S	M	R	P	L	T	S	P	K	P	V	N	I	A
Query Conservation
Alig confidence						.
Template Conservation						.
Template Sequence		G	T	E	F	.	T	V	N	D	L	Q	G	K	T	S	C
Template Known Secondary structure		T				.		G	G	G		T	T
Template Predicted Secondary structure						.
Template SS confidence
		101	.	.	.		.	.	.	.	.	110	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions