Return to main results Retrieve Phyre Job Id

Job DescriptionP30855
Confidence96.43%DateThu Jan 5 11:46:34 GMT 2012
Rank344Aligned Residues161
% Identity11%Templated1h3da1
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution2.7

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   95....100.........110.........120.........130.. .......140.........150.........160...
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Query Sequence  NIKLTLREYADHQKAMDALAEGEVDIVLSHLVTSPPLN. . . . . . . . . . . NDIAATKPLIITFPALVTTLHDSMRPLTSPK
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Template Sequence  NMPIDILRVR. DDDIPGLVMDGVVDLGIIGENVLEEELLNRRAQGEDPRYFTLRRLDFGGCRLSLATPVDEAWDGPLSLN
Template Known Secondary structure  SSS
.GGGTTSSST




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TTS



GGGGT
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   45....50.... .....60.........70.........80.........90.........100.........110.........120...
 
   164.....170.........180.........190.........200.........210.........220.........230.........240...
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Query Sequence  PVNIARVANYPPDEVIHQSFPKATIISFTNLYQALASVSAGHNDYFIGSNIITSSMISRYFTHSLNVVKYYNSPRQYNFF
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Template Sequence  GKRIATSYPHLLKRYLDQKGISFKSCLLNGSVE. . VAPRAGLADAIC. DLVSTGATLEANGLREVEVI. . . . YRSKACLI
Template Known Secondary structure  T
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   124.....130.........140.........150...... ...160........ .170.........180........ .190......
 
   244.....250. ........260...
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Query Sequence  LTRKESVI. LNEVLNRFVDAL
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Template Sequence  QRDGEMEESKQQLIDKLLTRI
Template Known Secondary structure  SS


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   197..200.........210.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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