Job Description P30855 Confidence 58.87% Date Thu Jan 5 11:46:34 GMT 2012 Rank 498 Aligned Residues 173 % Identity 11% Template d1dpea_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.00

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		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.				.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure																																																																	.	.	.
Query SS confidence																																																																	.	.	.
Query Sequence		A	T	I	I	S	F	T	N	L	Y	Q	A	L	A	S	V	S	A	G	H	N	D	Y	F	I	G	S	N	I	I	T	S	S	M	I	S	R	Y	F	T	H	S	L	N	V	V	K	Y	Y	N	S	P	R	Q	Y	N	F	F	L	T	R	K	E	.	.	.	S	V	I	L	N	E	V	L	N	R	F	V	D	A
Query Conservation																																																																	.	.	.
Alig confidence																																									.	.																							.	.	.													.	.
Template Conservation																																									.	.																																						.	.
Template Sequence		L	V	F	S	I	T	P	D	A	S	V	R	Y	A	K	L	Q	K	N	E	C	Q	V	M	P	Y	P	N	P	A	D	I	A	R	M	K	Q	D	K	.	.	S	I	N	L	M	E	M	P	G	L	N	V	G	Y	L	S	Y	N	V	Q	K	K	P	L	D	D	V	K	V	R	Q	A	L	T	Y	A	V	.	.
Template Known Secondary structure																			T	T	S		S	B		S	S			G	G	G								T	.	.	T									S									T	T	S	T	T	T	T	S										T	S	.	.
Template Predicted Secondary structure																																									.	.																																						.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.			.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.															.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	T	N	E	V	R	Y	E	V	S	Q	N	W	L	D	T	G	N	L	A	F	L	N	K	P	L	E	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	H	E	K	Q	W	I	K	Q	H	P	N	L	K	V	L	E	N	P	Y	S	P	P	Y	S	M	T	D	E	N	G	S	V	R	G	V	M
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Conservation		.	.	.	.																																																			.
Template Sequence		.	.	.	.	N	K	D	A	I	I	K	A	V	Y	Q	G	A	G	V	S	A	K	N	L	I	P	P	T	M	W	G	Y	N	D	D	V	Q	D	Y	T	Y	D	P	E	K	A	K	A	L	L	K	E	A	G	.	L	E	K	G	F	S	I	D	L	W	A	M	P	V	Q	R	P	Y	N	P	N	A	R	R	M
Template Known Secondary structure		.	.	.	.											T	T	S					S	S	S	S		T	T	S	T	T			T	T																		T	T	.		T	T										S	S		B	T	T	B	S
Template Predicted Secondary structure		.	.	.	.																																																			.
Template SS confidence
						290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	I	L	N	I	I	T	L	Q	T	G	L	N	F	S	P	I	T	V	S	H	N	I	H	A	G	T	Q	L	S	P	G	G	W	D	I	I	P	G
Query Conservation
Alig confidence																							.
Template Conservation																							.
Template Sequence		A	E	M	I	Q	A	D	W	A	K	V	G	V	Q	A	K	I	V	T	Y	E	.	W	G	E	Y	L	K	R	A	K	D	G	E	H	Q	T	V	M	M
Template Known Secondary structure											T	T	T										.										T	T			S
Template Predicted Secondary structure																							.
Template SS confidence
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.		.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions