Job Description P30855 Confidence 88.99% Date Thu Jan 5 11:46:34 GMT 2012 Rank 401 Aligned Residues 76 % Identity 13% Template d1dota2 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Transferrin Resolution 2.35

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		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.																			.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	L	L	K	R	A	L	N	I	K	L	T	L	R	E	Y	A	D	H	Q	K	A	M	D	A	L	A	E	G	E	V	D	I	V	L	S	H	L	V	T	S	P	P	L	N	N	D	I	A	A	T	K	P	L	I	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	F	P	A	L	V
Query Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.
Template Sequence		D	R	W	S	V	V	S	N	G	E	V	E	C	T	I	L	D	D	N	K	D	C	I	V	K	I	T	K	G	E	A	D	A	I	S	.	.	L	D	G	G	F	V	Y	T	A	G	V	C	G	L	V	P	V	V	G	E	S	Y	E	D	E	T	Q	C	S	K	D	E	E	Q	P	A	Y	Y	F	A	V	A	V
Template Known Secondary structure									T	S	S							S	S	S									T	T	S			B			.	.											T	T	T									S		T	T	S	S	S	S	S	S		S	S
Template Predicted Secondary structure																																					.	.
Template SS confidence
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.			.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	L	H	D	S	M	R	P	L	T	S	P	K	P	V	N
Query Conservation
Alig confidence									.
Template Conservation									.
Template Sequence		V	K	K	S	S	A	I	.	T	W	N	N	L	Q	G	K	K
Template Known Secondary structure				S		S			.		G	G	G		T	T
Template Predicted Secondary structure									.
Template SS confidence
		437	.	.	440	.	.	.		.	.	.	.	.	.	450	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions