Return to main results Retrieve Phyre Job Id

Job DescriptionP30855
Confidence96.90%DateThu Jan 5 11:46:34 GMT 2012
Rank334Aligned Residues193
% Identity13%Templated1amfa_
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution1.75

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  QRVRGINADYLNLLKRALNIKLTLREYADHQKAMDALAEGE. VDIVLSHLVTSPPLNNDIAATKP. . . . . LIITFPALVT
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Template Sequence  ASLTNAMQDIATQFKKEKGVDVVSSF. ASSSTLARQIEAGAPADLFISADQKWMDYAVDKKAIDTATRQTLLGNSLVVVA
Template Known Secondary structure  GGG

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   11........20.........30...... ...40.........50.........60.........70.........80.........
 
   151.... ....160... ......170.... .....180... ......190.........200.........210.
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Query Sequence  TLHDS. . . . . MRPLTSPK. . . . PVNIARVANYP. . . . . . PDEVIHQSF. . . . PKATIISFTNLYQALASVSAGHNDYFIG
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Template Sequence  PKASVQKDFTIDSKTNWTSLLNGGRLAVGDPEHVPAGIYAKEALQKLGAWDTLSPKLAPAEDVRGALALVERNEAPLGIV
Template Known Secondary structure  TT







STT

TT


TTT
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GGGSSTTSSS
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   90.........100.........110.........120.........130.........140.........150.........160.........
 
   212.......220.........230.........240.........250.........260.........270.....
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Query Sequence  SNIITSSMISRYFTHSLNVVKYYNSPRQYNFFLTRKESVILNEVLNRFVDALTNEVRYEVSQNW
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Template Sequence  YGS. . . DAVASKGVKVVATFPEDSHKKVEYPVAVVEGHNN. . ATVKAFYDYLKGPQAAEIFKRY
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   170.. .......180.........190.........200...... ...210.........220........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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