Job Description P30855 Confidence 99.10% Date Thu Jan 5 11:46:34 GMT 2012 Rank 211 Aligned Residues 204 % Identity 13% Template c3uifA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:sulfonate abc transporter, periplasmic sulfonate-binding PDBTitle: crystal structure of putative sulfonate abc transporter, periplasmic2 sulfonate-binding protein ssua from methylobacillus flagellatus kt Resolution 2.60 Å

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.				.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.
Predicted Secondary structure																																																			.	.	.																			.
Query SS confidence																																																			.	.	.																			.
Query Sequence		K	N	L	V	I	A	V	H	K	S	Q	T	A	T	L	L	H	T	D	S	Q	Q	R	V	R	G	I	N	A	D	Y	L	N	L	L	K	R	A	L	N	I	K	L	T	L	R	E	Y	A	.	.	.	D	H	Q	K	A	M	D	A	L	A	E	G	E	V	D	I	V	L	.	S	H	L	V	T	S	P	P	L
Query Conservation																																																			.	.	.																			.
Alig confidence																				.	.																														.	.	.																			.
Template Conservation																				.	.
Template Sequence		K	V	V	R	I	A	S	V	A	T	N	V	G	G	K	T	V	Y	.	.	A	G	S	A	S	L	V	V	N	G	A	F	P	E	E	L	R	K	Q	G	I	K	V	E	W	V	P	A	A	X	A	S	V	G	P	V	I	N	E	G	F	A	S	G	K	I	D	F	G	I	Y	G	D	L	P	P	I	I	L	N
Template Known Secondary structure														T	T					.	.		T								S	S								T	T										T	T												T	T									S
Template Predicted Secondary structure																				.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		132	.	.	.	.				.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.								.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure							.	.	.																																															.	.	.	.	.	.	.
Query SS confidence							.	.	.																																															.	.	.	.	.	.	.
Query Sequence		N	N	D	I	A	.	.	.	A	T	K	P	L	I	I	T	F	P	A	L	V	T	T	L	H	D	S	M	R	P	L	T	S	P	K	P	V	N	I	A	R	V	A	N	Y	P	P	D	E	V	I	H	Q	S	.	.	.	.	.	.	.	F	P	K	A	T	I	I	S	F	T	N	L	Y	Q	A	L	A	S	V
Query Conservation							.	.	.																																															.	.	.	.	.	.	.
Alig confidence							.	.	.																																															.	.	.	.	.	.	.										.
Template Conservation																																																																								.
Template Sequence		A	S	K	P	T	V	Q	L	V	A	P	W	G	T	T	S	N	S	Y	L	V	V	P	K	N	S	T	A	K	S	I	K	D	L	K	G	K	K	I	A	L	H	R	G	R	P	W	E	L	A	F	S	N	L	L	Q	S	E	G	L	T	F	K	D	F	K	I	V	N	V	.	N	P	Q	V	G	A	A	A	L
Template Known Secondary structure				S																					T	T					S	G	G	G	G	T	T	S						T	T	S	T												T	T			G	G	G	S						.
Template Predicted Secondary structure																																																																								.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.					.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure																																																	.	.	.	.
Query SS confidence																																																	.	.	.	.
Query Sequence		S	A	G	H	N	D	Y	F	I	G	S	N	I	I	T	S	S	M	I	S	R	Y	F	T	H	S	L	N	V	V	K	Y	Y	N	S	P	R	Q	Y	N	F	F	L	T	R	K	E	.	.	.	.	S	V	I	L	N	E	V	L	N	R	F	V	D	A
Query Conservation																																																	.	.	.	.
Alig confidence																																																	.	.	.	.
Template Conservation
Template Sequence		A	S	G	T	V	D	G	F	F	S	L	F	D	S	Y	I	L	E	D	R	G	V	G	K	I	I	W	S	T	K	T	A	P	V	D	W	K	L	X	G	G	V	W	A	R	N	D	F	V	K	Q	N	P	E	I	T	Q	A	I	V	T	A	Y	L	K
Template Known Secondary structure				T	S	S	S					S	T	T							T	T	S							G	G	G	S		G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions