Job Description P30855 Confidence 81.30% Date Thu Jan 5 11:46:34 GMT 2012 Rank 429 Aligned Residues 173 % Identity 13% Template c3tpaA_ PDB info PDB header:heme binding protein Chain: A: PDB Molecule:heme-binding protein a; PDBTitle: structure of hbpa2 from haemophilus parasuis Resolution 2.00 Å

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		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.				.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure																																																																.	.	.
Query SS confidence																																																																.	.	.
Query Sequence		A	T	I	I	S	F	T	N	L	Y	Q	A	L	A	S	V	S	A	G	H	N	D	Y	F	I	G	S	N	I	I	T	S	S	M	I	S	R	Y	F	T	H	S	L	N	V	V	K	Y	Y	N	S	P	R	Q	Y	N	F	F	L	T	R	K	.	.	.	E	S	V	I	L	N	E	V	L	N	R	F	V	D	A
Query Conservation																																																																.	.	.
Alig confidence																								.	.																																							.	.	.														.	.
Template Conservation																								.	.																																																							.	.
Template Sequence		L	I	F	S	I	T	P	D	A	G	T	R	Y	A	K	L	K	A	G	E	C	D	.	.	V	I	D	F	P	N	I	S	D	I	A	Q	M	K	K	D	P	Q	I	N	L	L	E	R	E	G	L	N	L	A	Y	I	G	L	N	T	T	K	P	E	L	N	N	V	K	V	R	Q	A	L	H	H	A	T	.	.
Template Known Secondary structure																			T	T	S		S	.	.			S	S										T	T		T	T									S									T	T	S	T	T	T	T	S										T		.	.
Template Predicted Secondary structure																								.	.																																																							.	.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.			.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.															.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	T	N	E	V	R	Y	E	V	S	Q	N	W	L	D	T	G	N	L	A	F	L	N	K	P	L	E	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	H	E	K	Q	W	I	K	Q	H	P	N	L	K	V	L	E	N	P	Y	S	P	P	Y	S	M	T	D	E	N	G	S	V	R	G	V	M
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.
Template Conservation		.	.	.	.																																																																										.
Template Sequence		.	.	.	.	D	K	K	A	I	V	D	A	V	Y	Q	G	G	G	T	V	A	T	N	P	F	P	D	A	V	L	G	Y	N	P	H	L	P	Q	Y	E	F	N	L	E	K	A	K	A	L	L	A	E	A	G	Y	P	N	G	F	E	T	E	I	W	V	Q	P	V	V	R	P	S	N	P	N	P	R	.	R	T
Template Known Secondary structure		.	.	.	.											T	T	S					S	S	S	S		T	T	S	T	T			T	T																		T	T		T	T										S	S		B	T	T	B	S				.
Template Predicted Secondary structure		.	.	.	.																																																																										.
Template SS confidence
						297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.		370	.
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	I	L	N	I	I	T	L	Q	T	G	L	N	F	S	P	I	T	V	S	H	N	I	H	A	G	T	Q	L	S	P	G	G	W	D	I	I	P	G
Query Conservation
Alig confidence																							.
Template Conservation																							.
Template Sequence		A	E	I	I	Q	A	D	W	A	K	I	G	V	K	A	K	L	V	T	H	E	.	W	A	D	F	N	K	R	T	R	E	G	E	F	A	A	G	T	Y
Template Known Secondary structure												T	T										.										T	T			S
Template Predicted Secondary structure																							.
Template SS confidence
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.		.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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