Job Description P30855 Confidence 99.88% Date Thu Jan 5 11:46:34 GMT 2012 Rank 78 Aligned Residues 127 % Identity 29% Template c3r0jA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:possible two component system response transcriptional PDBTitle: structure of phop from mycobacterium tuberculosis Resolution 2.50 Å

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		955	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	E	K	L	S	I	L	I	A	D	D	H	P	T	N	R	L	L	L	K	R	Q	L	N	L	L	G	Y	D	V	D	E	A	T	D	G	V	Q	A	L	H	K	V	S	M	Q	H	Y	D	L	L	I	T	D	V	N	M	P	N	M	D	G	F	E	L	T	R	K	L	R	E	Q	N	S	S	L	P	I	W
Query Conservation
Alig confidence																																																										.
Template Conservation																																																										.
Template Sequence		T	T	P	E	A	R	V	L	V	V	D	D	E	A	N	I	V	E	L	L	S	V	S	L	K	F	Q	G	F	E	V	Y	T	A	T	N	G	A	Q	A	L	D	R	A	R	E	T	R	P	D	A	V	I	L	D	V	.	X	P	G	X	D	G	F	G	V	L	R	R	L	R	A	D	G	I	D	A	P	A	L
Template Known Secondary structure				S	S								S															T	T							S	S														S							.			S	S												T	T
Template Predicted Secondary structure																																																										.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		1035	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	T	A	N	A	Q	A	N	E	R	E	K	G	L	S	C	G	M	N	L	C	L	F	K	P	L	T	L	D	V	L	K	T	H	L	S	Q	L	H	Q	V	A	H	I	A	P	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	L	T	A	R	D	S	L	Q	D	K	I	A	G	L	T	L	G	G	D	D	Y	V	T	K	P	F	S	L	E	E	V	V	A	R	L	R	V	I	L	R	R	A	G	K	N	V	R
Template Known Secondary structure						S	T	T									T	S	T	T						S	S
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions