Job Description P30855 Confidence 98.84% Date Thu Jan 5 11:46:34 GMT 2012 Rank 235 Aligned Residues 197 % Identity 11% Template c3qslA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative exported protein; PDBTitle: structure of cae31940 from bordetella bronchiseptica rb50 Resolution 2.00 Å

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		54	.	.	.	.	.	60	.	.				.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure											.	.	.
Query SS confidence											.	.	.
Query Sequence		S	K	K	N	L	V	I	A	V	.	.	.	H	K	S	Q	T	A	T	L	L	H	T	D	S	Q	Q	R	V	R	G	I	N	A	D	Y	L	N	L	L	K	R	A	L	N	I	K	L	T	L	R	E	Y	A	D	H	Q	K	A	M	D	A	L	A	E	G	E	V	D	I	V	L	S	H	L	V	T	S	P	P
Query Conservation											.	.	.
Alig confidence											.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	K	A	K	V	Q	I	A	V	G	G	K	P	L	I	Y	Y	L	P	L	T	I	A	E	V	K	G	F	F	.	.	.	.	.	.	.	.	.	.	.	.	K	D	E	G	L	D	V	S	I	A	D	F	A	G	G	S	K	A	L	Q	A	V	V	G	G	S	A	D	V	V	S	G	A	F	E	H	T	L	S
Template Known Secondary structure		S		S							S		T	T	S	G	G	G									T	T			.	.	.	.	.	.	.	.	.	.	.	.			T	T									S	S										T	T	S		S						T
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.													60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.							.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.									.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.
Query Sequence		L	N	N	D	I	A	A	T	K	P	L	I	I	T	F	.	.	.	.	.	.	P	A	L	V	T	T	L	H	D	S	M	R	P	L	T	S	P	K	P	V	N	I	A	R	V	A	N	Y	P	P	D	E	V	I	H	Q	S	.	.	.	.	.	.	.	.	F	P	K	A	T	I	I	S	F	T	N	L	Y	Q
Query Conservation																	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	Q	A	K	G	Q	F	Y	R	A	F	A	L	Q	G	R	A	P	X	I	G	V	G	V	S	K	K	N	L	P	G	Y	K	G	P	A	D	L	K	G	R	K	I	G	V	T	A	P	G	S	S	T	N	X	V	V	N	F	F	L	A	K	H	G	L	K	A	S	D	V	S	F	I	G	V	G	A	G	A	G
Template Known Secondary structure					T	T									S	B	S	S									T	T	T		T	T			S	G	G	G	G	T	T						S	S	T	T	S													T	T			G	G	G	S							S	S
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.								.	.	.	.	.	240	.	.	.	.	.	.	.	.					.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.															.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.															.	.	.	.
Query Sequence		A	L	A	S	V	S	A	G	H	N	D	Y	F	I	G	S	N	I	I	T	S	S	M	I	S	R	Y	F	T	H	S	L	N	V	V	K	Y	Y	.	.	.	.	.	.	.	N	S	P	R	Q	Y	N	F	F	L	T	R	K	E	.	.	.	.	S	V	I	L	N	E	V	L	N	R	F	V	D	A
Query Conservation																																								.	.	.	.	.	.	.															.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.															.	.	.	.
Template Conservation
Template Sequence		A	V	T	A	L	R	S	G	Q	I	D	A	I	S	N	T	D	P	V	V	S	X	L	E	T	S	G	D	I	Q	I	I	V	D	T	R	T	L	K	D	T	K	E	I	F	G	G	N	X	P	A	G	C	L	Y	A	P	Q	A	F	V	D	A	N	P	N	T	A	Q	A	L	T	N	A	I	V	R
Template Known Secondary structure									T	S		S						T	T								T	T									S	S									S	S
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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