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Job Description | P30855 | Confidence | 99.82% | Date | Thu Jan 5 11:46:34 GMT 2012 |
Rank | 150 | Aligned Residues | 123 |
% Identity | 30% | Template | c3q9sA_ |
PDB info |
PDB header:dna binding protein | Chain: A: PDB Molecule:dna-binding response regulator; |
PDBTitle: crystal structure of rra(1-215) from deinococcus radiodurans
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Resolution | 2.40 Å |
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958 | . | 960 | . | . | . | . | . | . | . | . | . | 970 | . | . | . | . | . | . | . | . | . | 980 | . | . | . | . | . | . | . | . | . | 990 | . | . | . | . | . | . | . | . | . | 1000 | . | . | . | . | . | . | . | . | . | 1010 | . | . | . | . | . | . | . | . | . | 1020 | . | . | . | . | . | . | . | . | . | 1030 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
K | L | S | I | L | I | A | D | D | H | P | T | N | R | L | L | L | K | R | Q | L | N | L | L | G | Y | D | V | D | E | A | T | D | G | V | Q | A | L | H | K | V | S | M | Q | H | Y | D | L | L | I | T | D | V | N | M | P | N | M | D | G | F | E | L | T | R | K | L | R | E | Q | N | S | S | L | P | I | W | G | L | T |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
E | Q | R | I | L | V | I | E | D | D | H | D | I | A | N | V | L | R | X | D | L | T | D | A | G | Y | V | V | D | H | A | D | S | A | X | N | G | L | I | K | A | R | E | D | H | P | D | L | I | L | L | D | L | G | L | P | D | F | D | G | G | D | V | V | Q | R | L | R | K | . |
N | S | A | L | P | I | I | V | L | T |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | |
. | . | . | . | . | . | . | . | 80 | . |
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1038 | . | 1040 | . | . | . | . | . | . | . | . | . | 1050 | . | . | . | . | . | . | . | . | . | 1060 | . | . | . | . | . | . | . | . | . | 1070 | . | . | . | . | . | . | . | . | . | 1080 | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
A | N | A | Q | A | N | E | R | E | K | G | L | S | C | G | M | N | L | C | L | F | K | P | L | T | L | D | V | L | K | T | H | L | S | Q | L | H | Q | V | A | H | I | A | P |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
A | R | D | T | V | E | E | K | V | R | L | L | G | L | G | A | D | D | Y | L | I | K | P | F | H | P | D | E | L | L | A | R | V | K | V | Q | L | R | Q | R | T | S | E | S |
Template Known Secondary structure |   |
S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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