Job Description P30855 Confidence 98.84% Date Thu Jan 5 11:46:34 GMT 2012 Rank 234 Aligned Residues 163 % Identity 8% Template c3p7nB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:sensor histidine kinase; PDBTitle: crystal structure of light activated transcription factor el222 from2 erythrobacter litoralis Resolution 2.10 Å

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		576	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.				.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.
Predicted Secondary structure																						.	.	.
Query SS confidence																						.	.	.
Query Sequence		S	F	R	K	A	L	S	D	S	L	P	N	P	T	Y	V	V	N	W	Q	.	.	.	G	N	V	I	S	H	N	S	A	F	E	H	Y	F	T	A	D	Y	Y	K	N	A	M	L	P	L	E	N	S	D	S	P	F	K	D	V	F	S	N	A	H	E	V	T	A	E	T	K	E	N	R	T	I	Y	T	Q	V
Query Conservation																						.	.	.
Alig confidence																						.	.	.																													.
Template Conservation																																																					.
Template Sequence		Q	W	V	L	D	L	I	E	A	S	P	I	A	S	V	V	S	D	P	R	L	A	D	N	P	L	I	A	I	N	Q	A	F	T	D	L	T	G	Y	S	E	E	E	C	V	G	R	N	C	R	F	.	L	A	G	S	G	T	E	P	W	L	T	D	K	I	R	Q	G	V	R	E	H	K	P	V	L	V	E	I
Template Known Secondary structure		S								T		S	S							T	T	S	T	T																						T	T	S		G	G	G	.	G	B		T	T	S														T	T
Template Predicted Secondary structure																																																					.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		653	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.					.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.
Query SS confidence																																															.	.	.	.
Query Sequence		F	E	I	D	N	G	I	E	K	R	C	I	N	H	W	H	T	L	C	N	L	P	A	S	D	N	A	V	Y	I	C	G	W	Q	D	I	T	E	T	R	D	L	I	N	A	.	.	.	.	L	E	V	E	K	N	K	A	I	K	A	T	V	A	K	S	Q	F	L	A	T	M	S	H	E	I	R	T	P	I	S
Query Conservation																																															.	.	.	.
Alig confidence																																															.	.	.	.
Template Conservation
Template Sequence		L	N	Y	K	K	D	G	T	P	F	R	N	A	V	L	V	A	P	I	Y	D	D	D	D	E	L	L	Y	F	L	G	S	Q	V	E	V	G	M	A	R	R	E	R	A	A	E	M	L	K	T	L	S	P	R	Q	L	E	V	T	T	L	V	A	S	G	L	R	N	K	E	V	A	A	R	L	G	L	S	E	K
Template Known Secondary structure						T	T	S															T	T	T	T																								T	T	S													T	T											T
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		729	730	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	M	G	F	L	E	L	L	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	V	K	M	H	R	G	L	V	M	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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