Return to main results Retrieve Phyre Job Id

Job DescriptionP30855
Confidence98.78%DateThu Jan 5 11:46:34 GMT 2012
Rank239Aligned Residues108
% Identity9%Templatec3oloB_
PDB info PDB header:transferaseChain: B: PDB Molecule:two-component sensor histidine kinase; PDBTitle: crystal structure of a pas domain from two-component sensor histidine2 kinase
Resolution2.09 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   572.......580.........590.........600.........610.........620.........630.........640.........650.
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  ENQISFRKALSDSLPNPTYVVNWQGNVISHNSAFEHYFTADYYKNAMLPLENSDSPFKDVFSNAHEVTAETKENRTIYTQ
Query Conservation   
       

   
  
 
 
  
 
   
 
     
                                         
Alig confidence 




























































......












Template Conservation 
  
     
     
 
   
  
 
   
       
    

 
              ......            
Template Sequence  ELEFKFAHYLINNAVEASFCLGDNWQFLYVNDATCRXTEYSREQLLSXNLQDIDVDFALHD. . . . . . WEEIRQKNNYTFK
Template Known Secondary structure 
SSTTSB
T

TT
BGGGTBTTGGGS
......TTSS
Template Predicted Secondary structure 

















......



Template SS confidence 















































































   6...10.........20.........30.........40.........50.........60...... ...70.........
 
   652.......660.........670.........680.......
Predicted Secondary structure 








Query SS confidence 



































Query Sequence  VFEIDNGIEKRCINHWHTLCNLPASDNAVYICGWQD
Query Conservation                          
     
    
Alig confidence 





















..











Template Conservation       


    

     
  .. 
       


Template Sequence  TRYRSQSGRIFLVEXSLTFLED. . QERRFSCVFVRE
Template Known Secondary structure 
TTS
..TT
Template Predicted Secondary structure 



..

Template SS confidence 



































   80.........90.........100. ........110...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions