Job Description P30855 Confidence 99.46% Date Thu Jan 5 11:46:34 GMT 2012 Rank 186 Aligned Residues 225 % Identity 14% Template c3n5lA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:binding protein component of abc phosphonate transporter; PDBTitle: crystal structure of a binding protein component of abc phosphonate2 transporter (pa3383) from pseudomonas aeruginosa at 1.97 a resolution Resolution 1.97 Å

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	K	N	L	V	I	A	V	H	K	S	Q	T	A	T	L	L	H	T	D	S	Q	Q	R	V	R	G	I	N	A	D	Y	L	N	L	L	K	R	A	L	N	I	K	L	T	L	R	E	Y	A	D	H	Q	K	A	M	D	A	L	A	E	G	E	V	D	I	V	L	S	H	L	V	T	S	P	P	L	N	N
Query Conservation
Alig confidence											.								.	.	.	.	.	.	.																																																.
Template Conservation											.								.	.	.	.	.	.	.																																																.
Template Sequence		D	Q	P	V	I	N	F	G	I	.	I	S	T	E	S	S	Q	.	.	.	.	.	.	.	N	L	K	S	I	W	E	P	F	L	K	D	X	S	Q	Q	T	G	Y	Q	V	K	A	F	F	A	P	D	Y	A	G	I	I	Q	G	X	R	F	D	K	V	D	I	A	W	Y	G	.	N	K	A	A	X	E	A	V
Template Known Secondary structure											.			S	S				.	.	.	.	.	.	.																		S	S								S	S										T	T	S		S						.
Template Predicted Secondary structure											.								.	.	.	.	.	.	.																																																.
Template SS confidence
		26	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.								.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.										.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.					.	.	.	.	.	.	.	.	170	.						.	.	.	.			.	.	.	.	180	.	.	.	.	.					.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.																	.	.	.	.											.	.	.	.	.					.	.											.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.																	.	.	.	.											.	.	.	.	.					.	.											.	.	.	.
Query Sequence		D	I	A	A	T	K	P	L	I	I	T	F	.	.	.	.	.	.	.	.	.	P	A	L	V	T	T	L	H	D	S	M	R	P	L	T	S	.	.	.	.	P	K	P	V	N	I	A	R	V	A	.	.	.	.	.	N	Y	P	P	.	.	D	E	V	I	H	Q	S	F	P	K	.	.	.	.	A	T	I	I
Query Conservation														.	.	.	.	.	.	.	.	.																	.	.	.	.											.	.	.	.	.					.	.											.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.																	.	.	.	.											.	.	.	.	.					.	.											.	.	.	.
Template Conservation
Template Sequence		D	R	A	H	G	E	I	F	A	Q	T	V	A	A	S	G	A	P	G	Y	W	S	L	L	I	A	N	K	D	S	K	I	D	S	L	E	D	X	L	A	N	A	K	S	L	T	F	G	N	G	D	P	N	S	T	S	G	Y	L	V	P	G	Y	Y	V	F	A	K	N	N	V	D	P	V	K	A	F	K	R	T
Template Known Secondary structure				S											T	T			S										T	T		S			S							T	G	G	G								T	T		T	T	T	T							T	T	T	T	T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.			.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.		.	250	.	.	.	.	.	.	.	.	.	260	.	.	.		.	.
Predicted Secondary structure																																						.	.																								.																.
Query SS confidence																																						.	.																								.																.
Query Sequence		S	F	T	N	L	Y	Q	A	L	A	S	V	S	A	G	H	N	D	Y	F	I	G	S	N	I	I	T	S	S	M	I	S	R	Y	F	T	.	.	H	S	L	N	V	V	K	Y	Y	N	S	P	R	Q	Y	N	F	F	L	T	R	K	E	.	S	V	I	L	N	E	V	L	N	R	F	V	D	A	L	.	T	N
Query Conservation																																						.	.																								.																.
Alig confidence																																						.	.												.												.																.
Template Conservation																																																			.
Template Sequence		L	N	S	S	H	E	V	N	A	L	A	V	A	N	K	Q	V	D	V	A	T	F	N	T	E	G	X	E	R	L	E	L	T	Q	P	E	K	A	R	Q	L	K	V	I	W	K	S	P	L	.	I	P	G	D	P	L	V	W	R	N	N	L	S	D	E	Q	K	N	K	L	R	D	F	F	F	K	Y	G	A	N
Template Known Secondary structure															T	T	S	S	S																					T	T										.										T	T	S																		S
Template Predicted Secondary structure																																																			.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	R	Y	E	V	S	Q	N	W	L	D	T	G	N	L	A	F	L	N	K	P	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	Q	K	K	V	L	A	D	L	Q	W	S	K	F	Q	A	S	D	D	D	Q	L
Template Known Secondary structure											T	T									G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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