Job Description P30855 Confidence 68.77% Date Thu Jan 5 11:46:34 GMT 2012 Rank 470 Aligned Residues 175 % Identity 14% Template c3m8uA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:heme-binding protein a; PDBTitle: crystal structure of glutathione-binding protein a (gbpa) from2 haemophilus parasuis sh0165 in complex with glutathione disulfide3 (gssg) Resolution 1.85 Å

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		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.				.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.
Query SS confidence																																																																				.	.	.
Query Sequence		S	F	P	K	A	T	I	I	S	F	T	N	L	Y	Q	A	L	A	S	V	S	A	G	H	N	D	Y	F	I	G	S	N	I	I	T	S	S	M	I	S	R	Y	F	T	H	S	L	N	V	V	K	Y	Y	N	S	P	R	Q	Y	N	F	F	L	T	R	K	.	.	.	E	S	V	I	L	N	E	V	L	N	R
Query Conservation																																																																				.	.	.
Alig confidence																														.	.																																					.	.	.
Template Conservation																														.	.
Template Sequence		D	I	D	R	L	I	F	E	I	V	P	D	A	T	A	R	Y	A	K	L	Q	A	G	A	C	D	L	I	.	.	D	F	P	N	A	A	D	L	E	K	M	K	T	D	P	K	V	N	L	H	S	Q	S	G	L	N	I	A	Y	I	A	F	N	T	E	K	A	P	F	D	N	V	K	V	R	Q	A	L	N	Y
Template Known Secondary structure		S		S																				T	S		S			.	.	S	S										T	S		T	T									S									T	T	S	T	T	T	T	S
Template Predicted Secondary structure																														.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.			.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.															.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	V	D	A	L	T	N	E	V	R	Y	E	V	S	Q	N	W	L	D	T	G	N	L	A	F	L	N	K	P	L	E	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	H	E	K	Q	W	I	K	Q	H	P	N	L	K	V	L	E	N	P	Y	S	P	P	Y	S	M	T	D	E	N	G	S	V
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Template Conservation				.	.	.	.	.	.																																																																			.
Template Sequence		A	V	.	.	.	.	.	.	D	K	N	A	I	I	D	A	V	Y	R	G	A	G	V	A	A	K	N	P	L	P	P	T	I	W	G	Y	N	N	E	I	T	G	Y	E	Y	S	P	E	K	A	K	Q	L	L	K	E	A	G	F	E	N	G	F	E	T	D	I	W	V	Q	P	V	V	R	.	A	S	N	P	N
Template Known Secondary structure		T		.	.	.	.	.	.									T	T	T	T	S					S	S	S	S		T	T	S	T	T			T	T																		T	T		T	T										S	S		B	.	T	T	B	S
Template Predicted Secondary structure				.	.	.	.	.	.																																																																			.
Template SS confidence
		312	.							.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.		380	.	.	.	.
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	V	M	G	D	I	L	N	I	I	T	L	Q	T	G	L	N	F	S	P	I	T	V	S	H	N	I	H	A	G	T	Q	L	S	P	G	G	W	D	I	I
Query Conservation
Alig confidence																											.
Template Conservation																											.
Template Sequence		P	R	R	M	A	E	L	V	Q	S	D	W	E	K	V	G	V	K	S	K	L	V	S	Y	E	.	W	G	D	Y	I	K	R	T	K	A	G	E	L	T	A	G
Template Known Secondary structure															T	T	T										.										T	T			S
Template Predicted Secondary structure																											.
Template SS confidence
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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