Job Description P30855 Confidence 99.96% Date Thu Jan 5 11:46:34 GMT 2012 Rank 22 Aligned Residues 223 % Identity 16% Template c3h7mA_ PDB info PDB header:transferase Chain: A: PDB Molecule:sensor protein; PDBTitle: crystal structure of a histidine kinase sensor domain with2 similarity to periplasmic binding proteins Resolution 2.40 Å

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	K	N	L	V	I	A	V	H	K	S	Q	T	A	T	L	L	H	T	D	S	Q	Q	R	V	R	G	I	N	A	D	Y	L	N	L	L	K	R	A	L	N	I	K	L	T	L	R	E	Y	A	D	H	Q	K	A	M	D	A	L	A	E	G	E	V	D	I	V	L	S	H	L	V	T	S	P	P	L	N	N
Query Conservation
Alig confidence											.																																										.																			.
Template Conservation											.																																										.																			.
Template Sequence		R	H	R	T	I	V	V	G	G	.	D	R	D	Y	P	P	Y	E	F	I	D	Q	N	G	K	P	A	G	Y	N	V	E	L	T	R	A	I	A	E	V	M	G	M	T	V	E	F	R	L	G	A	.	W	S	E	M	F	S	A	L	K	S	G	R	V	D	V	L	Q	G	.	I	S	W	S	E	K	R	A	R
Template Known Secondary structure		S	S	S							.		T			T	T	T					T	T	S				S														T										.	G	G	G							T	T	S	S	S					.									T
Template Predicted Secondary structure											.																																										.																			.
Template SS confidence
		54	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		D	I	A	A	T	K	P	L	I	I	T	F	P	A	L	V	T	T	L	H	D	.	S	M	R	P	L	T	S	P	K	P	V	N	I	A	R	V	A	N	Y	P	P	D	E	V	I	H	Q	S	F	P	K	A	T	I	I	S	F	T	N	L	Y	Q	A	L	A	S	V	S	A	G	H	N	D	Y	F	I	G	S
Query Conservation																							.
Alig confidence																							.
Template Conservation
Template Sequence		Q	I	D	F	T	P	P	H	T	I	V	Y	H	A	I	F	A	R	R	D	S	P	P	A	A	G	L	E	D	L	R	G	R	K	V	A	L	H	R	D	G	I	M	H	E	Y	L	A	E	R	G	Y	G	K	D	L	V	L	T	P	T	P	A	D	A	L	R	L	L	A	A	G	G	C	D	Y	A	V	V	A
Template Known Secondary structure		T																		S	S	S				S	S	G	G	G	G	T	T	S						T	T	S								T	T	T		G	G	G					S	S										T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.		.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		N	I	I	T	S	S	M	I	S	R	Y	F	T	H	S	L	N	V	V	K	Y	Y	N	S	P	R	Q	Y	N	F	F	L	T	R	K	E	S	V	I	L	N	E	V	L	N	R	F	V	D	A	L	T	N	E	.	V	R	Y	E	V	S	Q	N	W	L	D	T	G	N
Query Conservation																																																								.
Alig confidence																								.																																.
Template Conservation																								.
Template Sequence		M	V	P	G	M	Y	I	I	R	E	N	R	L	T	N	L	V	P	V	A	R	S	.	I	A	A	Q	R	Y	G	Y	A	V	R	Q	G	D	A	E	L	L	A	R	F	S	E	G	L	A	I	L	R	K	T	G	Q	Y	E	A	I	R	A	K	W	L	G	V	L	E
Template Known Secondary structure												T	T		T	T								.												T	T																			T									S	T	T
Template Predicted Secondary structure																								.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.		.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions