Return to main results Retrieve Phyre Job Id

Job DescriptionP30855
Confidence99.84%DateThu Jan 5 11:46:34 GMT 2012
Rank138Aligned Residues119
% Identity31%Templatec3grcD_
PDB info PDB header:transferaseChain: D: PDB Molecule:sensor protein, kinase; PDBTitle: crystal structure of a sensor protein from polaromonas sp.2 js666
Resolution2.21 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   957..960.........970.........980.........990.........1000.........1010.........1020........ .1030....
Predicted Secondary structure 























..



Query SS confidence 







































































. .





Query Sequence  EKLSILIADDHPTNRLLLKRQLNLLGYDVDEATDGVQALHKVSMQHYDLLITDVNMPNMDGFELTRKLREQN. . SSLPIW
Query Conservation      

 


           
   
  
  
  
  

        



 
  

 
 
      

   ..   


Alig confidence 







































































..





Template Conservation 

 






       
   
   
  
        
   
     



 
       
      

          
Template Sequence  PRPRILICEDDPDIARLLNLXLEKGGFDSDXVHSAAQALEQVARRPYAAXTVDLNLPDQDGVSLIRALRRDSRTRDLAIV
Template Known Secondary structure 

S
SSTT
SSTTS

S
SS
SSS
STTSTT
Template Predicted Secondary structure 




























Template SS confidence 















































































   546...550.........560.........570.........580.........590.........600.........610.........620.....
 
   1035....1040...... ...1050.........1060.........1070.....
Predicted Secondary structure 



.








Query SS confidence 











.




























Query Sequence  GLTANAQANERE. KGLSCGMNLCLFKPLTLDVLKTHLSQLHQ
Query Conservation    

        .     
    
 

     
   
     
Alig confidence 











.




























Template Conservation   
                
    
 

     
   
   
 
Template Sequence  VVSANAREGELEFNSQPLAVSTWLEKPIDENLLILSLHRAID
Template Known Secondary structure 
TTTTT
TTSSS
SS

Template Predicted Secondary structure 











Template SS confidence 









































   626...630.........640.........650.........660.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions