Job Description P30855 Confidence 96.21% Date Thu Jan 5 11:46:34 GMT 2012 Rank 350 Aligned Residues 191 % Identity 11% Template c3fj7A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:major antigenic peptide peb3; PDBTitle: crystal structure of l-phospholactate bound peb3 Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.							.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																																															.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.
Query Sequence		Q	R	V	R	G	I	N	A	D	Y	L	N	L	L	K	R	A	L	N	I	K	L	T	L	R	E	Y	A	D	H	Q	K	A	M	D	A	L	A	E	G	E	V	D	I	V	L	S	H	L	V	T	S	P	P	L	N	N	D	I	A	A	.	.	.	.	.	.	T	K	P	L	I	I	T	F	P	A	L	V	T
Query Conservation																																																															.	.	.	.	.	.
Alig confidence																												.																																			.	.	.	.	.	.
Template Conservation																												.
Template Sequence		G	G	P	H	T	A	L	K	D	I	A	N	K	Y	S	E	K	T	G	V	K	V	N	V	N	F	.	G	P	Q	A	T	W	F	E	K	A	K	K	D	A	D	I	L	F	G	A	S	D	Q	S	A	L	A	I	A	S	D	F	G	K	D	F	N	V	S	K	I	K	P	L	Y	F	R	E	A	I	I	L	T
Template Known Secondary structure		T	T	T																								.	S		G	G	G	T									S					S	S										T	T	G	G	G	S		G	G	G
Template Predicted Secondary structure																												.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		151	.	.	.			.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.																					.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	L	H	D	.	.	S	M	R	P	L	T	S	P	K	P	V	N	I	A	R	V	A	N	Y	P	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	I	H	Q	S	F	P	K	A	T	I	I	S	F	T	N	L	Y	Q	A	L	A	S	V	S	A	G	H	N	D	Y
Query Conservation						.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation																																																											.
Template Sequence		Q	K	G	N	P	L	K	I	K	G	L	K	D	L	A	N	K	K	V	R	I	V	V	P	E	G	A	G	K	S	N	T	S	G	T	G	V	W	E	D	M	I	G	R	T	Q	D	I	K	T	I	Q	N	F	R	N	N	.	I	V	A	F	V	P	N	S	G	S	A	R	K	L	F	A	Q	D	Q	A	D	A
Template Known Secondary structure		S	T	T		T	T				S							S										T	T	S	S			T	T	T	T							G	G	G												T	.						S	S										T	T			S
Template Predicted Secondary structure																																																											.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	G	S	N	I	I	T	S	S	M	I	S	R	Y	F	T	H	S	L	N	V	V	K	Y	Y	N	S	P	R	Q	Y	N	F	F	L	T	R	K	E	S	V	I	L	N	E	V	L	N	R	F	V	D	A	L	T	N	E	V	R	Y	E	V	S	Q	N	W
Query Conservation
Alig confidence					.	.	.																																								.	.	.
Template Conservation					.	.	.																																								.	.	.
Template Sequence		W	I	T	.	.	.	W	I	D	W	S	K	S	N	P	D	I	G	T	A	V	A	I	E	K	D	L	V	V	Y	R	T	F	N	V	I	A	K	E	G	A	S	K	E	T	.	.	.	Q	D	F	I	A	Y	L	S	S	K	E	A	K	E	I	F	K	K	Y
Template Known Secondary structure					.	.	.									T	T	S								T	T	T												T	T						.	.	.							T	T	S										T
Template Predicted Secondary structure					.	.	.																																								.	.	.
Template SS confidence
		186	.	.				.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.				.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions