Job Description P30855 Confidence 96.83% Date Thu Jan 5 11:46:34 GMT 2012 Rank 336 Aligned Residues 169 % Identity 12% Template c3eq1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:porphobilinogen deaminase; PDBTitle: the crystal structure of human porphobilinogen deaminase at2 2.8a resolution Resolution 2.80 Å

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		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																								.	.																						.
Query SS confidence																																								.	.																						.
Query Sequence		N	L	L	K	R	A	L	N	I	K	L	T	L	R	E	Y	A	D	H	Q	K	A	M	D	A	L	A	E	G	E	V	D	I	V	L	S	H	L	.	.	V	T	S	P	P	L	N	N	D	I	A	A	T	K	P	L	I	I	T	F	P	.	A	L	V	T	T	L	H	D	S	M	R	P	L	T	S	P	K	P
Query Conservation																																								.	.																						.
Alig confidence																			.	.																				.	.																						.
Template Conservation																			.	.
Template Sequence		T	L	K	A	S	Y	P	G	L	Q	F	E	I	I	A	F	T	.	.	K	E	L	E	H	A	L	E	K	N	E	V	D	L	V	V	H	S	L	K	D	L	P	T	V	L	P	P	G	F	T	I	G	A	I	C	K	R	E	N	P	H	D	A	V	V	F	H	P	K	F	V	G	K	T	L	E	T	L	P	E
Template Known Secondary structure							S	T	T										.	.									T	T	S		S						G	G	G	S		S	S			T	T																				G	G	G	T	T			G	G	G	S		T
Template Predicted Secondary structure																			.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.	.	240
Predicted Secondary structure																													.											.																															.	.
Query SS confidence																													.											.																															.	.
Query Sequence		V	N	I	A	R	V	A	N	Y	P	P	D	E	V	I	H	Q	S	F	P	K	A	T	I	I	S	F	.	T	N	L	Y	Q	A	L	A	S	V	.	S	A	G	H	N	D	Y	F	I	G	S	N	I	I	T	S	S	M	I	S	R	Y	F	T	H	S	L	N	V	V	.	.	K	Y	Y	N	S	P	R	Q	Y
Query Conservation																													.											.																															.	.
Alig confidence																													.											.																															.	.
Template Conservation
Template Sequence		K	S	V	V	G	T	S	S	L	R	R	A	A	Q	L	Q	R	K	F	P	H	L	E	F	R	S	I	Q	G	N	L	N	T	R	L	R	K	L	D	E	Q	Q	E	F	S	A	I	I	L	A	T	A	G	L	Q	R	M	G	W	H	N	R	V	G	Q	I	L	H	P	E	E	C	M	Y	A	V	G	Q	G	A
Template Known Secondary structure		T																			T	T	S							S											T	S	S	S		S													T		G	G	G							T	T	T			B		T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	F	F	L	T	R	K	E	S	V	I	L	N	E	V	L	N	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	V	E	V	R	A	K	D	Q	D	I	L	D	L	V	G	V
Template Known Secondary structure								T	T									G	G
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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