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Job DescriptionP30855
Confidence100.00%DateThu Jan 5 11:46:34 GMT 2012
Rank4Aligned Residues252
% Identity17%Templatec3d2rB_
PDB info PDB header:transferaseChain: B: PDB Molecule:[pyruvate dehydrogenase [lipoamide]] kinase isozyme 4; PDBTitle: crystal structure of pyruvate dehydrogenase kinase isoform 4 in2 complex with adp
Resolution2.03 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   690.........700.........710.........720.........730......... 740.........750.........760...
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Query Sequence  ETRDLINALEVEKNKAIKATVAKSQFLATMSHEIRTPISSIMGFLELLSG. . . . . . SGLSKEQRVEAISLAYATGQSLLG
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Template Sequence  WYIQSLMDLVEFHEKSPDDQKALSDFVDTLIKVRNRHHNVVPTMAQGIIEYKACTVDPVTNQNLQYFLDRFYMNRISTRM
Template Known Secondary structure  GGGGS
TT
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   91........100.........110.........120.........130.........140.........150.........160.........170
 
   764.....770.........780.. .......790.........800.... .....810.........820.........830..
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Query Sequence  LIGEILDVDKIESGNYQLQ. . . . PQWVDIPTLVQNTCHSFGAIAA. . . . . . . SKSIALSCSSTFPEHYLVKIDPQAFKQV
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Template Sequence  LMNQHILIFSDSQTGNPSHIGSIDPNCDVVAVVQDAFECSRMLCDQYYLSSPELKLTQVNGKFPDQPIHIVYVPSHLHHM
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   172.......180.........190.........200.........210.........220.........230.........240.........250.
 
   833......840.... .....850.........860.........870.........880.........890.........900....
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Query Sequence  LSNLLSNALKFT. . . . . . . . TEGAVKITTSLGHIDDNHAVIKMTIMDSGSGLSQEEQQQLFKRYSQTSAGRQQTGSGLGL
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Template Sequence  LFELFKNAMRATVEHQENQPSLTPIEVIVV. . . . . LGKEDLTIKISDRGGGVPLRIIDRLFSYTYSTAPTPPLAGFGYGL
Template Known Secondary structure  TTTSSS


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GGGTTGGGSTT

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   252.......260.........270.........280. ........290.........300.........310.........320......
 
   905....910.........920.........930.........940......
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Query Sequence  MICKELIKNMQGDLSLESHPGIGTTFTITIPVEISQQVATVE
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Template Sequence  PISRLYAKYFQGDLNLYSLSGYGTDAIIYLKALSSESIEKLP
Template Known Secondary structure  TT
TTTSSTTT
B



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   335....340.........350.........360.........370......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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