Job Description P30855 Confidence 99.61% Date Thu Jan 5 11:46:34 GMT 2012 Rank 178 Aligned Residues 89 % Identity 19% Template c3cwoX_ PDB info PDB header:de novo protein Chain: X: PDB Molecule:beta/alpha-barrel protein based on 1thf and 1tmy; PDBTitle: a beta/alpha-barrel built by the combination of fragments2 from different folds Resolution 3.10 Å

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		985	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	E	A	T	D	G	V	Q	A	L	H	K	V	S	M	Q	H	Y	D	L	L	I	T	D	V	N	M	P	N	M	D	G	F	E	L	T	R	K	L	R	E	Q	N	S	S	L	P	I	W	G	L	T	A	N	A	Q	A	N	E	R	E	K	G	L	S	C	G	M	N	L	C	L	F	K	P	L	T	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	D	A	T	N	G	R	E	A	V	E	K	Y	K	E	L	K	P	D	I	V	T	M	D	I	T	M	P	E	M	N	G	I	D	A	I	K	E	I	M	K	I	D	P	N	A	K	I	I	V	C	S	A	M	G	Q	Q	A	M	V	I	E	A	I	K	A	G	A	K	D	F	I	V	N	T	A	A	V	E
Template Known Secondary structure							S	S	S	T	T										S								S	T	T	S	S												S	S	S									S	S	T										T	T							S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		1065	.	.	.	.	1070	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	K	T	H	L	S	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	P	S	L	I	T	Q	I	A
Template Known Secondary structure			T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions