Job Description P30855 Confidence 81.13% Date Thu Jan 5 11:46:34 GMT 2012 Rank 431 Aligned Residues 105 % Identity 12% Template c3c85A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:putative glutathione-regulated potassium-efflux system PDBTitle: crystal structure of trka domain of putative glutathione-regulated2 potassium-efflux kefb from vibrio parahaemolyticus Resolution 1.90 Å

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		952	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	I	T	L	P	E	K	L	S	I	L	I	A	D	D	H	P	T	N	R	L	L	L	K	R	Q	L	N	L	L	G	Y	D	V	D	E	A	T	D	G	V	Q	A	L	H	K	V	S	M	Q	H	Y	D	L	L	I	T	D	V	N	M	P	N	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	L	I	N	P	G	H	A	Q	V	L	I	L	G	X	G	R	I	G	T	G	A	Y	D	E	L	R	A	R	Y	G	K	I	S	L	G	I	E	I	R	E	E	A	A	Q	Q	H	R	S	E	G	R	N	V	I	S	G	D	A	T	D	P	D	F	W	E	R	I	L	D	T	G	H	V	K	L	V	L	L	A
Template Known Secondary structure				B			T	T		S							S																S							S											T	T								T	T							T	B		S
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
							1016	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	D	G	F	E	L	T	R	K	L	R	E	Q	N	S	S	L	P	I	W	G	L	T	A	N	A	Q	A	N	E	R	E	K	G	L	S	C	G	M	N	L	C	L	F
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.																								.	.
Template Conservation																														.	.
Template Sequence		X	P	H	H	Q	G	N	Q	T	A	L	E	Q	L	Q	R	R	N	Y	K	G	Q	I	A	A	I	A	E	.	.	Y	P	D	Q	L	E	G	L	L	E	S	G	V	D	A	A	F	N
Template Known Secondary structure			S	S														T	T			S							S	.	.	S											T		S
Template Predicted Secondary structure																														.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions