Job Description P30855 Confidence 64.06% Date Thu Jan 5 11:46:34 GMT 2012 Rank 486 Aligned Residues 101 % Identity 12% Template c3bwbA_ PDB info PDB header:transferase Chain: A: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of the apo form of spermidine synthase from2 trypanosoma cruzi at 2.5 a resolution Resolution 2.50 Å

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		956	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.							.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.			.	.	.	.	.	.	1020	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.																															.	.
Query SS confidence																														.	.	.	.	.	.																															.	.
Query Sequence		P	E	K	L	S	I	L	I	A	D	D	H	P	T	N	R	L	L	L	K	R	Q	L	N	L	L	G	Y	.	.	.	.	.	.	D	V	D	E	A	T	D	G	V	Q	A	L	H	K	V	S	M	Q	H	Y	D	L	L	I	T	D	V	N	M	P	.	.	N	M	D	G	F	E	L	T	R	K	L	R	E	Q
Query Conservation																														.	.	.	.	.	.																															.	.
Alig confidence																														.	.	.	.	.	.																															.	.
Template Conservation
Template Sequence		G	T	V	E	H	C	D	L	V	D	I	D	G	E	V	X	E	Q	S	K	Q	H	F	P	Q	I	S	R	S	L	A	D	P	R	A	T	V	R	V	G	D	G	L	A	F	V	R	Q	T	P	D	N	T	Y	D	V	V	I	I	D	T	T	D	P	A	S	K	L	F	G	E	A	F	Y	K	D	V	L	R	I
Template Known Secondary structure		T	T									S																	G	G	G	G		T	T						S								T	S		T	T										S						S	S
Template Predicted Secondary structure
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		1028	.	1030	.	.	.	.	.	.	.	.	.	1040								.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.
Query Sequence		N	S	S	L	P	I	W	G	L	T	A	N	A	.	.	.	.	.	.	.	Q	A	N	E	R	E	K	G	L	S	C	G	M	N	L	C
Query Conservation															.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	K	P	D	G	I	C	C	N	Q	G	E	S	I	W	L	D	L	E	L	I	E	K	X	S	R	F	I	R	E	T	G	F	A	S	V
Template Known Secondary structure															T	T	T																T		S
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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