Job Description P30855 Confidence 100.00% Date Thu Jan 5 11:46:34 GMT 2012 Rank 2 Aligned Residues 333 % Identity 20% Template c3a0rA_ PDB info PDB header:transferase Chain: A: PDB Molecule:sensor protein; PDBTitle: crystal structure of histidine kinase thka (tm1359) in complex with2 response regulator protein trra (tm1360) Resolution 3.80 Å

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		577	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	R	K	A	L	S	D	S	L	P	N	P	T	Y	V	V	N	W	Q	G	N	V	I	S	H	N	S	A	F	E	H	Y	F	T	A	D	Y	Y	K	N	A	M	L	P	L	E	N	S	D	S	P	F	K	D	V	F	S	N	A	H	E	V	T	A	E	T	K	E	N	R	T	I	Y	T	Q	V	F	E	I	D
Query Conservation
Alig confidence																																																																		.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.
Template Sequence		F	S	E	S	I	L	E	S	L	E	T	A	I	I	T	L	S	K	D	G	R	I	T	E	W	N	K	K	A	E	Q	L	F	G	L	K	K	E	N	V	L	G	R	R	L	K	D	L	P	D	F	E	E	I	G	S	V	A	E	S	V	F	E	N	.	.	.	.	.	.	.	.	K	E	P	V	F	L	N	F
Template Known Secondary structure					S	S	G	G	G	S	S	S							S	S	S	B		S		B									S			S	T	T	T	T	T		B	S	T	T	S	T	T	T	T													.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.
Template SS confidence
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.									.	480	.	.	.	.	.	.
		657	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	I	E	K	R	C	I	N	H	W	H	T	L	C	N	L	P	A	S	D	N	A	V	Y	I	C	G	W	Q	D	I	T	E	T	R	D	L	I	N	A	L	E	V	E	K	N	K	A	I	K	A	T	V	A	K	S	Q	F	L	A	T	M	S	H	E	I	R	T	P	I	S	S	I	M	G	F	L	E	L
Query Conservation
Alig confidence																																																					.	.	.	.
Template Conservation																																																					.	.	.	.
Template Sequence		Y	K	F	G	E	R	Y	F	N	I	R	F	S	P	F	R	N	A	K	T	Q	L	L	E	G	V	I	I	T	I	D	D	V	T	E	L	Y	K	Y	E	E	E	R	K	R	R	E	R	L	S	I	.	.	.	.	L	G	E	M	T	A	R	V	A	H	E	I	R	N	P	I	T	I	I	G	G	F	I	M	R
Template Known Secondary structure				B	T	T	B												T	T	T	T	S	S											S	T	T	T	T	T	T	T	T	T	T								.	.	.	.
Template Predicted Secondary structure																																																					.	.	.	.
Template SS confidence
		487	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.					.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.
		737	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	G	S	G	L	S	K	E	Q	R	V	E	A	I	S	L	A	Y	A	T	G	Q	S	L	L	G	L	I	G	E	I	L	D	V	D	K	I	E	S	G	N	Y	Q	L	Q	P	Q	W	V	D	I	P	T	L	V	Q	N	T	C	H	S	F	G	A	I	A	A	S	K	S	I	A	L	S	C	S	S	T	F
Query Conservation
Alig confidence																																							.	.	.	.
Template Conservation																																							.	.	.	.
Template Sequence		M	K	K	H	L	D	D	P	E	T	L	K	K	Y	I	N	I	I	T	N	E	L	S	R	L	E	T	I	V	K	E	I	L	E	Y	S	K	.	.	.	.	E	R	V	L	E	F	T	E	F	N	L	N	E	L	I	R	E	V	Y	V	L	F	E	E	K	I	R	K	M	N	I	D	F	C	F	E	T	D	N
Template Known Secondary structure			T	T	S		S		S	S		T	T																										.	.	.	.																											T	T	T	T								S
Template Predicted Secondary structure																																							.	.	.	.
Template SS confidence
		563	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.					600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.
		817	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	H	Y	L	V	K	I	D	P	Q	A	F	K	Q	V	L	S	N	L	L	S	N	A	L	K	F	T	T	E	G	A	V	K	I	T	T	S	L	G	H	I	D	D	N	H	A	V	I	K	M	T	I	M	D	S	G	S	G	L	S	Q	E	E	Q	Q	Q	L	F	K	R	Y	S	Q	T	S	A	G	R	Q
Query Conservation
Alig confidence						.																												.												.	.	.																										.	.	.	.	.	.	.	.
Template Conservation						.																												.												.	.	.																										.	.	.	.	.	.	.	.
Template Sequence		E	D	L	R	.	V	E	A	D	R	T	R	I	K	Q	V	L	I	N	L	V	Q	N	A	I	E	A	T	G	E	N	G	.	K	I	K	I	T	S	E	D	M	Y	T	.	.	.	K	V	R	V	S	V	W	N	S	G	P	P	I	P	E	E	L	K	E	K	I	F	S	P	F	.	.	.	.	.	.	.	.
Template Known Secondary structure		S				.																	T					T	T		T	T		.										T	T	.	.	.										S					G	G	G	G	T	T	T	S	S	S		.	.	.	.	.	.	.	.
Template Predicted Secondary structure						.																												.												.	.	.																										.	.	.	.	.	.	.	.
Template SS confidence
		640	.	.	.		.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670		.	.	.	.	.	.	.	.	.	680	.				.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.
		897	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.		.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		Q	T	G	S	G	L	G	L	M	I	C	K	E	L	I	K	.	N	M	Q	G	D	L	S	L	E	S	H	P	G	I	G	T	T	F	T	I	T	I	P	V	E	I	S	Q	Q
Query Conservation																		.
Alig confidence		.	.															.												.
Template Conservation		.	.																											.
Template Sequence		.	.	F	T	T	L	G	L	S	I	C	R	K	I	I	E	D	E	H	G	G	K	I	W	T	E	N	R	.	E	N	G	V	V	F	I	F	E	I	P	K	T	P	E	K	R
Template Known Secondary structure		.	.							T									T	T		S	B							.	S	S										S		T	T
Template Predicted Secondary structure		.	.																											.
Template SS confidence
				707	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.		.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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