Job Description P30855 Confidence 95.61% Date Thu Jan 5 11:46:34 GMT 2012 Rank 358 Aligned Residues 159 % Identity 16% Template c2ypnA_ PDB info PDB header:transferase Chain: A: PDB Molecule:protein (hydroxymethylbilane synthase); PDBTitle: hydroxymethylbilane synthase Resolution 2.30 Å

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		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.								.	.	.	.	.	.
Predicted Secondary structure																					.	.																																															.	.	.	.	.	.	.
Query SS confidence																					.	.																																															.	.	.	.	.	.	.
Query Sequence		N	L	L	K	R	A	L	N	I	K	L	T	L	R	E	Y	A	D	H	.	.	Q	K	A	M	D	A	L	A	E	G	E	V	D	I	V	L	S	H	L	V	T	S	P	P	L	N	N	D	I	A	A	T	K	P	L	I	I	T	F	P	A	L	V	T	T	L	.	.	.	.	.	.	.	H	D	S	M	R	P
Query Conservation																					.	.																																															.	.	.	.	.	.	.
Alig confidence																					.	.																			.	.	.	.	.	.	.																						.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.
Template Sequence		K	L	M	A	S	H	P	G	L	V	V	E	L	V	P	M	V	G	L	F	V	K	E	L	E	V	A	L	L	E	N	R	A	D	I	A	V	H	S	.	.	.	.	.	.	.	M	K	D	V	P	V	E	F	P	Q	G	L	G	L	V	T	I	C	E	R	E	D	P	R	D	A	F	V	S	N	N	Y	D	S
Template Known Secondary structure								T	T																						T	T	S		S						.	.	.	.	.	.	.	G	G	G	S		S				T	T																			S	S		S	S
Template Predicted Secondary structure																																									.	.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.								.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		159	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure						.																														.
Query SS confidence						.																														.
Query Sequence		L	T	S	P	.	K	P	V	N	I	A	R	V	A	N	Y	P	P	D	E	V	I	H	Q	S	F	P	K	A	T	I	I	S	F	.	T	N	L	Y	Q	A	L	A	S	V	S	A	G	H	N	D	Y	F	I	G	S	N	I	I	T	S	S	M	I	S	R	Y	F	T	H	S	L	N	V	V	K	Y	Y	N	S
Query Conservation						.																														.
Alig confidence						.									.																					.																									.	.	.	.
Template Conservation															.																																														.	.	.	.
Template Sequence		L	D	A	L	P	A	G	S	I	V	G	T	S	.	S	L	R	R	Q	C	Q	L	A	E	R	R	P	D	L	I	I	R	S	L	R	G	N	V	G	T	R	L	S	K	L	D	N	G	E	Y	D	A	I	I	L	A	V	A	G	.	.	.	.	L	K	R	L	G	L	E	S	R	I	R	A	A	L	P	P	E
Template Known Secondary structure		S	T	T			T	T							.													T	T	S							S											T	T	S		S									.	.	.	.				T	T		G	G	G							T	T
Template Predicted Secondary structure															.																																														.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.					.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		237	.							.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.
Query Sequence		P	R	.	.	.	.	.	.	Q	Y	N	F	F	L	T	R	K	E	S	V	I	L	N	E	V	L	N	R
Query Conservation				.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.
Template Conservation
Template Sequence		I	S	L	P	A	V	G	Q	G	A	V	G	I	E	C	R	L	D	D	S	R	T	R	E	L	L	A	A
Template Known Secondary structure		T	S				T	T	T	T								T	T									G	G
Template Predicted Secondary structure
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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