Job Description P30855 Confidence 93.43% Date Thu Jan 5 11:46:34 GMT 2012 Rank 382 Aligned Residues 164 % Identity 15% Template c2ql3G_ PDB info PDB header:transcription Chain: G: PDB Molecule:probable transcriptional regulator, lysr family protein; PDBTitle: crystal structure of the c-terminal domain of a probable lysr family2 transcriptional regulator from rhodococcus sp. rha1 Resolution 2.05 Å

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		81	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																.																																																																.	.
Query SS confidence																.																																																																.	.
Query Sequence		G	I	N	A	D	Y	L	N	L	L	K	R	A	L	.	N	I	K	L	T	L	R	E	Y	A	D	H	Q	K	A	M	D	A	L	A	E	G	E	V	D	I	V	L	S	H	L	V	T	S	P	P	L	N	N	D	I	A	A	T	K	P	L	I	I	T	F	P	A	L	V	T	T	L	H	D	S	M	R	.	.
Query Conservation																.																																																																.	.
Alig confidence																.									.																													.	.	.	.																							.	.
Template Conservation																									.																													.	.	.	.
Template Sequence		T	I	L	P	S	X	L	Y	A	F	T	A	E	Y	P	R	A	S	V	E	F	R	E	.	D	T	Q	N	R	L	R	T	Q	L	E	G	G	E	L	D	V	A	I	V	Y	D	L	D	L	S	P	E	.	.	.	.	W	Q	T	V	P	L	X	T	R	E	P	X	V	V	L	G	A	E	H	P	L	A	G	V
Template Known Secondary structure		T	T													T	T								.													T	S		S						S	S	S			S	S	.	.	.	.																	T	T	S	T	T	T	T	S
Template Predicted Secondary structure																									.																													.	.	.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.					.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
						158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.						.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																			.	.	.	.	.
Query SS confidence		.	.	.	.																			.	.	.	.	.
Query Sequence		.	.	.	.	P	L	T	S	P	K	P	V	N	I	A	R	V	A	N	Y	P	P	.	.	.	.	.	D	E	V	I	H	Q	S	F	P	K	A	T	I	I	S	F	T	N	L	Y	Q	A	L	A	S	V	S	A	G	H	N	D	Y	F	I	G	S	N	I	I	T	S	S	M	I	S	R	Y	F	T	H	S	L
Query Conservation		.	.	.	.																			.	.	.	.	.
Alig confidence		.	.	.	.																			.	.	.	.	.
Template Conservation
Template Sequence		D	G	P	V	R	L	A	D	L	A	E	H	P	X	V	L	L	D	A	P	P	S	T	N	H	A	X	D	V	C	R	E	A	G	F	A	P	R	V	A	Y	R	T	A	N	F	E	T	A	R	A	F	V	G	R	G	L	G	W	T	L	L	L	Q	R	P	R	V	D	V	T	Y	E	G	L	P	V	V	V	K
Template Known Secondary structure			S		B		G	G	G	G	T	T	S								T	T												T	T										S												T	S		B				S				S	S		B		T	T	S		B
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	V	K	Y	Y	N	S	P	R	Q	Y	N	F	F	L	T	R	K	E	S	V
Query Conservation
Alig confidence										.
Template Conservation										.
Template Sequence		P	I	A	E	P	K	P	A	.	S	V	A	V	V	V	A	W	H	Q	E	A	T
Template Known Secondary structure			B		S	S				.										T	T
Template Predicted Secondary structure										.
Template SS confidence
		269	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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