Job Description P30855 Confidence 99.96% Date Thu Jan 5 11:46:34 GMT 2012 Rank 28 Aligned Residues 222 % Identity 13% Template c2q89A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:putative abc transporter amino acid-binding protein; PDBTitle: crystal structure of ehub in complex with hydroxyectoine Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	S	K	K	N	L	V	I	A	V	H	K	S	Q	T	A	T	L	L	H	T	D	S	Q	Q	R	V	R	G	I	N	A	D	Y	L	N	L	L	K	R	A	L	N	I	K	L	T	L	R	E	Y	A	D	H	Q	K	A	M	D	A	L	A	E	G	E	V	D	I	V	L	S	H	L	V	T	S	P	P	L
Query Conservation
Alig confidence													.	.
Template Conservation													.	.
Template Sequence		L	K	E	Q	G	F	A	R	I	A	I	.	.	A	N	E	P	P	F	T	A	V	G	A	D	G	K	V	S	G	A	A	P	D	V	A	R	E	I	F	K	R	L	G	V	A	D	V	V	A	S	I	S	E	Y	G	A	M	I	P	G	L	Q	A	G	R	H	D	A	I	T	A	G	L	F	M	K	P	E	R
Template Known Secondary structure													.	.				T	T	T	S				T	T					S													T	T											G	G	G							T	T	S		S				S			B
Template Predicted Secondary structure													.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.			.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.						.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.																									.
Query SS confidence																													.	.	.	.	.																									.
Query Sequence		N	N	D	I	A	A	T	K	P	L	I	I	T	F	P	A	L	V	T	T	L	H	D	S	M	R	P	.	.	.	.	.	L	T	S	P	K	P	V	N	I	A	R	V	A	N	Y	P	P	D	E	V	I	H	Q	S	.	F	P	K	A	T	I	I	S	F	T	N	L	Y	Q	A	L	A	S	V	S	A	G	H
Query Conservation																													.	.	.	.	.																									.
Alig confidence																													.	.	.	.	.																									.
Template Conservation
Template Sequence		C	A	A	V	A	Y	S	Q	P	I	L	C	D	A	E	A	F	A	L	K	K	G	N	P	L	G	L	K	S	Y	K	D	I	A	D	N	P	D	A	K	I	G	A	P	G	G	G	T	E	E	K	L	A	L	E	A	G	V	P	R	D	R	V	I	V	V	P	D	G	Q	S	G	L	K	M	L	Q	D	G	R
Template Known Secondary structure			T	T	S				S													T	T		T	T				B						T		T	T							T	T	S										T			G	G	G					S	S											T	S
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.		.	.	.	270	.	.	.	.	.
Predicted Secondary structure																												.																																				.
Query SS confidence																												.																																				.
Query Sequence		N	D	Y	F	I	G	S	N	I	I	T	S	S	M	I	S	R	Y	F	T	H	S	L	N	V	V	.	K	Y	Y	N	S	P	R	Q	Y	N	F	F	L	T	R	K	E	S	V	I	L	N	E	V	L	N	R	F	V	D	A	L	T	N	E	.	V	R	Y	E	V	S	Q	N	W
Query Conservation																												.																																				.
Alig confidence																												.																																				.
Template Conservation
Template Sequence		I	D	V	Y	S	L	P	V	L	S	I	N	D	L	V	S	K	A	N	D	P	N	V	E	V	L	A	P	V	E	G	A	P	V	Y	C	D	G	A	A	F	R	K	G	D	E	A	L	R	D	A	F	D	V	E	L	A	K	L	K	E	S	G	E	F	A	K	I	I	E	P	Y
Template Known Secondary structure			S																	T		T	T						S		B	T						B						G	G	G																		T							G	G	G
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions