Job Description P30855 Confidence 99.10% Date Thu Jan 5 11:46:34 GMT 2012 Rank 212 Aligned Residues 123 % Identity 10% Template c2l4rA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:potassium voltage-gated channel subfamily h member 2; PDBTitle: nmr solution structure of the n-terminal pas domain of herg Resolution UNK

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		569	570	.	.	.	.	.	.	.	.	.	580	.				.	.	.	.	.	.	.	.	590	.	.	.	.				.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620		.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.
Predicted Secondary structure															.	.	.														.	.	.																											.
Query SS confidence															.	.	.														.	.	.																											.
Query Sequence		G	D	L	E	N	Q	I	S	F	R	K	A	L	.	.	.	S	D	S	L	P	N	P	T	Y	V	V	N	W	.	.	.	Q	G	N	V	I	S	H	N	S	A	F	E	H	Y	F	T	A	D	Y	Y	K	N	A	M	L	P	.	L	E	N	S	D	S	P	F	K	D	V	F	S	N	A	H	E	V	T	A	E
Query Conservation															.	.	.														.	.	.																											.
Alig confidence															.	.	.														.	.	.																											.
Template Conservation
Template Sequence		G	H	V	A	P	Q	N	T	F	L	D	T	I	I	R	K	F	E	G	Q	S	R	K	F	I	I	A	N	A	R	V	E	N	C	A	V	I	Y	C	N	D	G	F	C	E	L	C	G	Y	S	R	A	E	V	M	Q	R	P	C	T	C	D	F	L	H	G	P	R	T	Q	R	R	A	A	A	Q	I	A	Q	A
Template Known Secondary structure		S							S	S	T	T	T	T								S								T	T		S	S	S	S		S											T							T	T			T	T		G	G	G			T	T	S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		642	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	K	E	N	R	T	I	Y	T	Q	V	F	E	I	D	N	G	I	E	K	R	C	I	N	H	W	H	T	L	C	N	L	P	A	S	D	N	A	V	Y	I	C	G	W	Q	D	I	T	E	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	G	A	E	E	R	K	V	E	I	A	F	Y	R	K	D	G	S	C	F	L	C	L	V	D	V	V	P	V	K	N	E	D	G	A	V	I	M	F	I	L	N	F	E	V	V	M	E	K
Template Known Secondary structure					T		S										T	T	S															T	T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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