Job Description P30855 Confidence 98.76% Date Thu Jan 5 11:46:34 GMT 2012 Rank 242 Aligned Residues 113 % Identity 2% Template c2kdkA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:aryl hydrocarbon receptor nuclear translocator-like protein PDBTitle: structure of human circadian clock protein bmal2 c-terminal pas domain Resolution UNK

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		581	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	D	S	L	P	N	P	T	Y	V	V	N	W	Q	G	N	V	I	S	H	N	S	A	F	E	H	Y	F	T	A	D	Y	Y	K	N	A	M	L	P	L	E	N	S	D	S	P	F	K	D	V	F	S	N	A	H	E	V	T	A	E	T	K	E	N	R	T	I	Y	T	Q	V	F	E	I	D	N	G	I	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	N	V	K	P	T	E	F	I	T	R	F	A	V	N	G	K	F	V	Y	V	D	Q	R	A	T	A	I	L	G	Y	L	P	Q	E	L	L	G	T	S	C	Y	E	Y	F	H	Q	D	D	H	N	N	L	T	D	K	H	K	A	V	L	Q	S	K	E	K	I	L	T	D	S	Y	K	F	R	A	K	D	G	S
Template Known Secondary structure						S	S								T	T	S	B						T						T				T	T	T	S	B	T	S	B	T	T	T	T	B		S	S	S													T	S	S	S												S	S	S
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
		661	.	.	.	.	.	.	.	.	670	.	.	.	.	.		.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		K	R	C	I	N	H	W	H	T	L	C	N	L	P	A	.	S	D	N	A	V	Y	I	C	G	W	Q	D	I	T	E	T	R	D
Query Conservation																	.
Alig confidence																	.
Template Conservation
Template Sequence		F	V	T	L	K	S	Q	W	F	S	F	T	N	P	D	T	K	E	L	E	Y	I	V	S	V	N	T	L	V	L	G	H	S	E
Template Known Secondary structure																S	S	S													S	S
Template Predicted Secondary structure
Template SS confidence
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions