Return to main results Retrieve Phyre Job Id

Job DescriptionP30855
Confidence99.87%DateThu Jan 5 11:46:34 GMT 2012
Rank106Aligned Residues117
% Identity21%Templatec2jrlA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: solution structure of the beryllofluoride-activated ntrc4 receiver2 domain dimer
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   959960.........970.........980.........990.........1000.........1010.........1020.........1030........
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  LSILIADDHPTNRLLLKRQLNLLGYDVDEATDGVQALHKVSMQHYDLLITDVNMPNMDGFELTRKLREQNSSLPIWGLTA
Query Conservation    

 


           
   
  
  
  
  

        



 
  

 
 
      

      


  

Alig confidence 















































































Template Conservation    





       
   
   
  
       


  
     
 

 
  

   
      
        

 

 
Template Sequence  KRVLVVDDEESITSSLSAILEEEGYHPDTAKTLREAEKKIKELFFPVIVLDVWMPDGDGVNFIDFIKENSPDSVVIVITG
Template Known Secondary structure 
B
S
TT
B

S
TTS

SS

SSS
STTT
SS
S
Template Predicted Secondary structure 





































Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   10391040.........1050.........1060.........1070.....
Predicted Secondary structure 











Query SS confidence 




































Query Sequence  NAQANEREKGLSCGMNLCLFKPLTLDVLKTHLSQLHQ
Query Conservation               
    
 

     
   
     
Alig confidence 




































Template Conservation               

  

 

     
   
   
 
Template Sequence  HGSVDTAVKAIKKGAYEFLEKPFSVERFLLTIKHAFE
Template Known Secondary structure  S

TS


Template Predicted Secondary structure 










Template SS confidence 




































   82.......90.........100.........110........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions