Job Description P30855 Confidence 97.21% Date Thu Jan 5 11:46:34 GMT 2012 Rank 325 Aligned Residues 98 % Identity 17% Template c1zxnB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:dna topoisomerase ii, alpha isozyme; PDBTitle: human dna topoisomerase iia atpase/adp Resolution 2.51 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		829	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.			.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.									880	.	.	.	.	.	.	.	.	.	890	.	.	.
Predicted Secondary structure																					.	.																																	.	.	.	.	.	.	.	.															.	.	.	.	.
Query SS confidence																					.	.																																	.	.	.	.	.	.	.	.															.	.	.	.	.
Query Sequence		F	K	Q	V	L	S	N	L	L	S	N	A	L	K	F	T	T	E	G	.	.	A	V	K	I	T	T	S	L	G	H	I	D	D	N	H	A	V	I	K	M	T	I	M	D	S	G	S	G	L	S	Q	E	.	.	.	.	.	.	.	.	E	Q	Q	Q	L	F	K	R	Y	S	Q	T	S	A	.	.	.	.	.
Query Conservation																					.	.																																	.	.	.	.	.	.	.	.															.	.	.	.	.
Alig confidence																					.	.														.	.	.	.	.															.	.	.	.	.	.	.	.															.	.	.	.	.
Template Conservation																																				.	.	.	.	.
Template Sequence		L	Y	K	I	F	D	E	I	L	V	N	A	A	D	N	K	Q	R	D	P	K	M	S	C	I	R	V	T	I	D	P	E	N	N	.	.	.	.	.	L	I	S	I	W	N	N	G	K	G	I	P	V	V	E	H	K	V	E	K	M	Y	V	P	A	L	I	F	G	Q	L	L	T	S	S	N	Y	D	D	D	E
Template Known Secondary structure																G	G	G	T		T	T										T	T	T	T	.	.	.	.	.								S	S					S			T	T	T	T										S	S	S			S				G	G	G
Template Predicted Secondary structure																																				.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.						.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
			894	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	G	R	Q	Q	T	G	S	G	L	G	L	M	I	C	K	E	L	I	K	N	M	Q	G	D	L	S	L	E	S	H	P	G	I	G	T	T	F	T	I	T	I
Query Conservation		.
Alig confidence		.																											.	.	.
Template Conservation																													.	.	.
Template Sequence		K	K	V	T	G	G	R	N	G	Y	G	A	K	L	C	N	I	F	S	T	K	F	T	V	E	T	A	.	.	.	S	R	E	Y	K	K	M	F	K	Q	T	W
Template Known Secondary structure						S			S	S									T										.	.	.		G	G	G	T
Template Predicted Secondary structure																													.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.				.	.	.	.	.	.	.	190	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions