Job Description P30855 Confidence 100.00% Date Thu Jan 5 11:46:34 GMT 2012 Rank 7 Aligned Residues 243 % Identity 17% Template c1y8oA_ PDB info PDB header:transferase Chain: A: PDB Molecule:[pyruvate dehydrogenase [lipoamide]] kinase isozyme 3; PDBTitle: crystal structure of the pdk3-l2 complex Resolution 2.48 Å

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		692	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.								740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.
Query Sequence		R	D	L	I	N	A	L	E	V	E	K	N	K	A	I	K	A	T	V	A	K	S	Q	F	L	A	T	M	S	H	E	I	R	T	P	I	S	S	I	M	G	F	L	E	L	L	S	G	.	.	.	.	.	.	.	S	G	L	S	K	E	Q	R	V	E	A	I	S	L	A	Y	A	T	G	Q	S	L	L	G	L
Query Conservation																																																		.	.	.	.	.	.	.
Alig confidence																																																		.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	Q	S	F	L	E	L	L	E	Y	E	N	K	S	P	E	D	P	Q	V	L	D	N	F	L	Q	V	L	I	K	V	R	N	R	H	N	D	V	V	P	T	M	A	Q	G	V	I	E	Y	K	E	K	F	G	F	D	P	F	I	S	T	N	I	Q	Y	F	L	D	R	F	Y	T	N	R	I	S	F	R	M	L
Template Known Secondary structure										G	G	G	G			T	T																			G	G	G
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		765	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.						.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.								.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.
Predicted Secondary structure																				.	.	.	.	.																									.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.																									.	.	.	.	.	.	.
Query Sequence		I	G	E	I	L	D	V	D	K	I	E	S	G	N	Y	Q	L	Q	.	.	.	.	.	P	Q	W	V	D	I	P	T	L	V	Q	N	T	C	H	S	F	G	A	I	A	A	S	K	.	.	.	.	.	.	.	S	I	A	L	S	C	S	S	T	F	P	E	H	Y	L	V	K	I	D	P	Q	A	F	K	Q	V
Query Conservation																				.	.	.	.	.																									.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.																									.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	N	Q	H	T	L	L	F	G	G	D	T	N	P	V	H	P	K	H	I	G	S	I	D	P	T	C	N	V	A	D	V	V	K	D	A	Y	E	T	A	K	M	L	C	E	Q	Y	Y	L	V	A	P	E	L	E	V	E	E	F	N	A	K	A	P	D	K	P	I	Q	V	V	Y	V	P	S	H	L	F	H	M
Template Known Secondary structure										S			S	S		S	S	T	T	S	B	T	T	B																										S												T	T	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		833	.	.	.	.	.	.	840	.	.	.	.										.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.
Query Sequence		L	S	N	L	L	S	N	A	L	K	F	T	.	.	.	.	.	.	.	.	.	T	E	G	A	V	K	I	T	T	S	L	G	H	I	D	D	N	H	A	V	I	K	M	T	I	M	D	S	G	S	G	L	S	Q	E	E	Q	Q	Q	L	F	K	R	Y	S	Q	T	S	A	G	R	Q	Q	T	G	S	G	L	G
Query Conservation														.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.											.	.	.	.	.																																	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.																																	.	.	.	.	.	.	.
Template Sequence		L	F	E	L	F	K	N	S	M	R	A	T	V	E	L	Y	E	D	R	K	E	G	Y	P	A	V	K	T	L	V	T	.	.	.	.	.	L	G	K	E	D	L	S	I	K	I	S	D	L	G	G	G	V	P	L	R	K	I	D	R	L	F	N	Y	M	Y	S	P	.	.	.	.	.	.	.	L	F	G	Y	G
Template Known Secondary structure																		T	T		S	S											.	.	.	.	.			S	S										S									G	G	G	G		T	T	T			.	.	.	.	.	.	.			T	T
Template Predicted Secondary structure																																	.	.	.	.	.																																	.	.	.	.	.	.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.						.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.								.	.	310	.	.
		904	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	I	C	K	E	L	I	K	N	M	Q	G	D	L	S	L	E	S	H	P	G	I	G	T	T	F	T	I	T	I	P	V	E	I	S	Q	Q	V	A	T	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	P	I	S	R	L	Y	A	R	Y	F	Q	G	D	L	K	L	Y	S	M	E	G	V	G	T	D	A	V	I	Y	L	K	A	L	S	S	E	S	F	E	R	L	P
Template Known Secondary structure												T	T									T	T	T										S		G	G	G		B
Template Predicted Secondary structure
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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