Job Description P30855 Confidence 96.14% Date Thu Jan 5 11:46:34 GMT 2012 Rank 351 Aligned Residues 113 % Identity 15% Template c1y80A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:predicted cobalamin binding protein; PDBTitle: structure of a corrinoid (factor iiim)-binding protein from2 moorella thermoacetica Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		955	.	.	.	.	960	.	.	.	.					.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.				.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.			.	.	.	.	1020	.	.	.	.	.
Predicted Secondary structure												.	.	.	.																							.	.	.																														.	.
Query SS confidence												.	.	.	.																							.	.	.																														.	.
Query Sequence		L	P	E	K	L	S	I	L	I	A	.	.	.	.	D	D	H	P	T	N	R	L	L	L	K	R	Q	L	N	L	L	G	Y	D	V	D	.	.	.	E	A	T	D	G	V	Q	A	L	H	K	V	S	M	Q	H	Y	D	L	L	I	T	D	V	N	M	P	N	M	.	.	D	G	F	E	L	T	R	K	L	R
Query Conservation												.	.	.	.																							.	.	.																														.	.
Alig confidence												.	.	.	.																							.	.	.																														.	.
Template Conservation
Template Sequence		M	P	S	V	G	K	I	V	L	G	T	V	K	G	D	L	H	D	I	G	K	N	L	V	A	M	M	L	E	S	G	G	F	T	V	Y	N	L	G	V	D	I	E	P	G	K	F	V	E	A	V	K	K	Y	Q	P	D	I	V	G	M	S	A	L	L	T	T	T	M	M	N	M	K	S	T	I	D	A	L	I
Template Known Secondary structure													B	T	T																	T	T								S	S	B															S								S	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		1026	.			.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		E	Q	.	.	N	S	S	L	P	I	W	G	L	T	A	N	A	Q	A	N	E	R	E	K	G	L	S	C	G	M	N	L	C	L	F	K	P	L	T	L	D	V	L	K	T	H	L
Query Conservation				.	.
Alig confidence				.	.																						.	.	.
Template Conservation																											.	.	.
Template Sequence		A	A	G	L	R	D	R	V	K	V	I	V	G	G	A	P	L	S	Q	D	F	A	D	E	I	.	.	.	G	A	D	G	Y	A	P	D	A	A	S	A	T	E	L	C	R	Q	L
Template Known Secondary structure			T	T		G	G	G							S	T	T										.	.	.	T		S				S	S
Template Predicted Secondary structure																											.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.				190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions