Job Description P30855 Confidence 79.40% Date Thu Jan 5 11:46:34 GMT 2012 Rank 436 Aligned Residues 148 % Identity 15% Template c1x1oC_ PDB info PDB header:transferase Chain: C: PDB Molecule:nicotinate-nucleotide pyrophosphorylase; PDBTitle: crystal structure of project id tt0268 from thermus thermophilus hb8 Resolution 1.90 Å

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		903	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930						.	.	.	.
Predicted Secondary structure																														.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	L	M	I	C	K	E	L	I	K	N	M	Q	G	D	L	S	L	E	S	H	P	G	I	G	T	T	F	.	.	.	.	.	T	I	T	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																														.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	L	W	V	A	E	R	V	F	A	L	A	D	P	R	T	A	F	T	P	L	V	A	E	G	A	R	V	A	E	G	T	E	V	A	R	V	R	G	P	L	R	G	I	L	A	G	E	R	L	A	L	N	L	L	Q	R	L	S	G	I	A	T	L	T	R	A	Y	V	E	A	L	A	G	T	K	A	Q	I	L
Template Known Secondary structure															T	T							S		T	T					T	T																																									T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
								935	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970					.	.	.	.	.	.	.	.	.	980	.	.	.	.				.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.
Predicted Secondary structure		.	.	.	.	.	.																																					.	.	.	.															.	.	.
Query SS confidence		.	.	.	.	.	.																																					.	.	.	.															.	.	.
Query Sequence		.	.	.	.	.	.	P	V	E	I	S	Q	Q	V	A	T	V	E	A	K	A	E	Q	P	I	T	L	P	E	K	L	S	I	L	I	A	D	D	H	P	T	N	.	.	.	.	R	L	L	L	K	R	Q	L	N	L	L	G	Y	D	.	.	.	V	D	E	A	T	D	G	V	Q	A	L	H	K	V	S	M	Q
Query Conservation		.	.	.	.	.	.																																					.	.	.	.															.	.	.
Alig confidence		.	.	.	.	.	.																																					.	.	.	.															.	.	.
Template Conservation
Template Sequence		D	T	R	K	T	T	P	G	L	R	A	L	E	K	Y	A	V	R	V	G	G	G	R	N	H	R	Y	G	L	F	D	G	I	L	L	K	E	N	H	V	R	A	A	G	G	V	G	E	A	V	R	R	A	K	A	R	A	P	H	Y	L	K	V	E	V	E	V	R	S	L	E	E	L	E	E	A	L	E	A	G
Template Known Secondary structure				S				T	T												T	T		B				S	S	S	S	S													T	S														T	T	S							S	S									T	T	T
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		1002	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Y	D	L	L	I	T	D	V	N	M	P	N	M	D	G	F	E	L	T	R	K	L	R	E	Q	N	S	S	L	P	I	W	G	L	T	A	N	A	Q	A	N	E	R	E	K	G	L	S	C	G	M	N	L	C
Query Conservation
Alig confidence		.								.	.	.	.																						.
Template Conservation		.								.	.	.	.																						.
Template Sequence		.	A	D	L	I	L	L	D	.	.	.	.	N	F	P	L	E	A	L	R	E	A	V	R	R	V	G	G	R	V	P	L	E	.	A	S	G	N	M	T	L	E	R	A	K	A	A	A	E	A	G	V	D	Y	V
Template Known Secondary structure		.		S						.	.	.	.	S														T	T	S	S				.			S	S													T		S
Template Predicted Secondary structure		.								.	.	.	.																						.
Template SS confidence
			217	.	.	220	.	.	.					.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions