Job Description P30855 Confidence 91.27% Date Thu Jan 5 11:46:34 GMT 2012 Rank 387 Aligned Residues 79 % Identity 11% Template c1ce2A_ PDB info PDB header:metal transport Chain: A: PDB Molecule:protein (lactoferrin); PDBTitle: structure of diferric buffalo lactoferrin at 2.5a resolution Resolution 2.50 Å

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		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.																			.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	L	L	K	R	A	L	N	I	K	L	T	L	R	E	Y	A	D	H	Q	K	A	M	D	A	L	A	E	G	E	V	D	I	V	L	S	H	L	V	T	S	P	P	L	N	N	D	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	K	P	L	I	I	T	F	P	A	L	V
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	Q	W	S	Q	Q	S	G	Q	I	V	T	C	A	T	A	S	T	T	D	D	C	I	A	L	V	L	K	G	E	A	D	A	L	S	L	D	G	G	Y	I	Y	T	A	G	K	C	G	L	V	P	V	L	A	E	N	R	K	S	S	K	H	S	S	L	D	C	V	L	R	P	T	E	G	Y	L	A	V	A	V
Template Known Secondary structure									T	S	S							S	S										T	T	S																T	T	T												S	T	T	T	T	S		T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	L	H	D	S	M	R	P	L	T	S	P	K	P	V	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	K	A	N	E	G	L	T	W	N	S	L	K	G	K	K
Template Known Secondary structure				T	T	S	T	T			G	G	G		T	T
Template Predicted Secondary structure
Template SS confidence
		439	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions