Job Description P64550 Confidence 7.91% Date Thu Jan 5 12:09:22 GMT 2012 Rank 25 Aligned Residues 43 % Identity 19% Template c3a7kD_ PDB info PDB header:membrane protein Chain: D: PDB Molecule:halorhodopsin; PDBTitle: crystal structure of halorhodopsin from natronomonas2 pharaonis Resolution 2.00 Å

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	M	Y	R	D	L	F	M	R	A	A	R	K	V	S	P	S	G	W	I	K	N	L	A	D	I	L	A	Y	V	T	F	Q	S	P	V	Y	V	A	I	L	L	V	V	G	A	D	W	H	Q	I	M	A	A	V	S	S	N	I	V	V	S	M	L	M	G
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.																.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.																.
Template Sequence		W	G	R	Y	L	T	W	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	P	M	I	L	L	.	A	L	G	L	L	A	G	S	N	A	T	K	L	F	T	.	A	I	T	F	D	I	A	M	C	V	T	G
Template Known Secondary structure		T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.						T	T									.
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.																.
Template SS confidence
		121	.	.	.	.	.	.	.	.																							130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions