Job Description P69488 Confidence 62.72% Date Thu Jan 5 12:11:43 GMT 2012 Rank 18 Aligned Residues 35 % Identity 23% Template d2csoa1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain DEP domain Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40															.	.	.	.	.	.	.	.	.	50	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	P	D	E	A	T	A	Q	D	L	A	A	K	V	L	A	E	K	L	A	A	C	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	I	P	G	A	T	S	L	Y	Y	W
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	R	N	R	Q	E	G	L	M	I	A	S	S	L	L	N	E	G	Y	L	Q	P	A	G	D	M	S	K	S	A	V	D	G	T	A	E	N	P	F	L	D	N	P	D	A	F	Y	Y	F
Template Known Secondary structure			S	S															T	S	S				S									S	S		S							T	T
Template Predicted Secondary structure
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions