Return to main results Retrieve Phyre Job Id

Job DescriptionP69488
Confidence22.69%DateThu Jan 5 12:11:43 GMT 2012
Rank27Aligned Residues25
% Identity8%Templated1o7fa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain DEP domain
Resolution2.5

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40.
Predicted Secondary structure 





Query SS confidence 
























Query Sequence  TAPDEATAQDLAAKVLAEKLAACAT
Query Conservation 
 

 
 
  

  


 






Alig confidence 
























Template Conservation     

 


 


 

  


 

 
Template Sequence  CVHSRTQAVGMWQVLLEDGVLNHVD
Template Known Secondary structure 

S
TTSSS
Template Predicted Secondary structure 








Template SS confidence 
























   233......240.........250.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions