Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFK0
Confidence8.94%DateThu Jan 5 11:26:33 GMT 2012
Rank12Aligned Residues50
% Identity16%Templatec2d1cB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:isocitrate dehydrogenase; PDBTitle: crystal structure of tt0538 protein from thermus thermophilus hb8
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   210.........220.........230.........240.........250.........260......
Predicted Secondary structure 

















Query SS confidence 
























































Query Sequence  GRAMSDLQTPEWVGADCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAG
Query Conservation        
             
   
 
     
 
 


 
 
   

         
Alig confidence 























.......

























Template Conservation 
 


 
      


    

  .......
  





 











 
 
Template Sequence  AQEYPDIEAVHIIVDNAAHQLVKR. . . . . . . PEQFEVIVTTNMNGDILSDLTSGLIG
Template Known Secondary structure  TT
TTS
.......GGG
S
TTTT
Template Predicted Secondary structure 




.......










Template SS confidence 
























































   210.........220.........230... ......240.........250.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions