Job Description P33369 Confidence 100.00% Date Thu Jan 5 11:52:09 GMT 2012 Rank 1 Aligned Residues 448 % Identity 23% Template d1wp1a_ SCOP info Outer membrane efflux proteins (OEP) Outer membrane efflux proteins (OEP) Outer membrane efflux proteins (OEP) Resolution 2.56

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.				.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		C	A	P	M	H	E	T	R	Q	A	L	S	Q	Q	T	.	.	.	P	A	A	Q	V	D	T	A	L	P	T	A	L	K	M	V	G	Q	T	X	Q	W	W	L	E	Y	H	D	N	Q	L	T	S	L	I	N	N	A	L	Q	N	A	P	D	M	Q	V	A	E	Q	R	I	Q	L	A	E	A	Q	A	K	A	V
Query Conservation																	.	.	.
Alig confidence																	.	.	.
Template Conservation
Template Sequence		C	S	L	I	P	D	Y	Q	R	P	E	A	P	V	A	A	A	Y	P	Q	G	Q	A	Y	G	Q	N	T	G	A	A	A	V	P	A	A	D	I	G	W	R	E	F	F	R	D	P	Q	L	Q	Q	L	I	G	V	A	L	E	N	N	R	D	L	R	V	A	A	L	N	V	E	A	F	R	A	Q	Y	R	I	Q
Template Known Secondary structure															S		S	S				S	T	T							S		S	S		G	G	G	S						B
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	Q	D	G	P	Q	I	D	F	S	A	D	M	E	R	Q	K	M	S	A	E	G	L	M	G	P	F	A	L	N	D	P	A	A	G	T	T	G	P	W	Y	T	N	G	T	F	G	L	T	A	G	W	H	L	D	I	W	G	K	N	R	A	E	V	T	A	R	L	G	T	V	K	A	R	A	A	E	R	E
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.
Template Sequence		R	A	D	L	F	P	R	I	G	V	D	G	S	G	T	R	Q	R	L	P	G	.	.	.	.	.	.	.	.	.	D	L	S	T	T	G	S	P	A	I	S	S	Q	Y	G	V	T	L	G	T	T	A	W	E	L	D	L	F	G	R	L	R	S	L	R	D	Q	A	L	E	Q	Y	L	A	T	E	Q	A	Q	R
Template Known Secondary structure				T	T	S				B				B					B			T	.	.	.	.	.	.	.	.	.	T	T	S	S	S	S	S			B									B								T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.										.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	R	Q	L	L	A	G	S	V	A	R	L	Y	W	E	W	Q	T	Q	A	A	L	N	T	V	L	Q	Q	I	E	K	E	Q	N	T	I	I	A	T	D	R	Q	L	Y	Q	N	G	I	T	S	S	V	E	G	V	E	T	D	I	N	A	S	K	T	R	Q	Q	L	N	D	V	A	G	K	M	K	I	I	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	Q	T	T	L	V	A	S	V	A	T	A	Y	L	T	L	K	A	D	Q	A	Q	L	Q	L	T	K	D	T	L	G	T	Y	Q	K	S	F	D	L	T	Q	R	S	Y	D	V	G	V	A	S	A	L	D	L	R	Q	A	Q	T	A	V	E	G	A	R	A	T	L	A	Q	Y	T	R	L	V	A	Q	D	Q
Template Known Secondary structure																																																T	T		S
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.		.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		A	R	L	S	A	L	T	N	N	Q	T	K	S	L	K	L	K	P	V	A	L	P	K	V	A	S	Q	L	P	.	D	E	L	G	Y	S	L	L	A	R	R	A	D	L	Q	A	A	H	W	Y	V	E	S	S	L	S	T	I	D	A	A	K	A	A	F	Y	P	D	I	N	L	M	A	F	L	Q	Q	D	A	L
Query Conservation																															.
Alig confidence																															.
Template Conservation
Template Sequence		N	A	L	V	L	L	L	G	S	G	I	P	A	N	L	P	Q	G	L	G	L	D	Q	T	L	L	T	E	V	P	A	G	L	P	S	D	L	L	Q	R	R	P	D	I	L	E	A	E	H	Q	L	M	A	A	N	A	S	I	G	A	A	R	A	A	F	F	P	S	I	S	L	T	A	N	A	G	T	M	S	R
Template Known Secondary structure									T	S				S	S							T	T	S			B								T	T																													T	T	S														S
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	S	D	L	F	R	H	S	A	Q	Q	M	G	V	T	A	G	L	T	L	P	I	F	D	S	G	R	L	N	A	N	L	D	I	A	K	A	E	S	N	L	S	I	A	S	Y	N	K	A	V	V	E	A	V	N	D	V	A	R	A	A	S	Q	V	Q	T	L	A	E	K	N	Q	H	Q	A	Q	I	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	L	S	G	L	F	D	A	G	S	G	S	W	L	F	Q	P	S	I	N	L	P	I	F	T	A	G	S	L	R	A	S	L	D	Y	A	K	I	Q	K	D	I	N	V	A	Q	Y	E	K	A	I	Q	T	A	F	Q	E	V	A	D	G	L	A	A	R	G	T	F	T	E	Q	L	Q	A	Q	R	D	L	V	K
Template Known Secondary structure		S	G	G	G	T	T	S	T	T																	S	S																																							T	T
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
		418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	L	R	V	V	G	L	A	Q	A	R	F	N	A	G	I	I	A	G	S	R	V	S	E	A	R	I	P	A	L	R	E	R	A	N	G	L	L	L	Q	G	Q	W	L	D	A	S	I	Q	L	T	G	A	L	G	G	G	Y	K	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S	D	E	Y	Y	Q	L	A	D	K	R	Y	R	T	G	V	D	N	Y	L	T	L	L	D	A	Q	R	S	L	F	T	A	Q	Q	Q	L	I	T	D	R	L	N	Q	L	T	S	E	V	N	L	Y	K	A	L	G	G	G	W	N	Q
Template Known Secondary structure																T	T	S	S																																						T		S			S
Template Predicted Secondary structure
Template SS confidence
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.