Job Description P33369 Confidence 3.09% Date Thu Jan 5 11:52:09 GMT 2012 Rank 66 Aligned Residues 61 % Identity 15% Template c3njqB_ PDB info PDB header:viral protein/inhibitor Chain: B: PDB Molecule:orf 17; PDBTitle: crystal structure of kaposi's sarcoma-associated herpesvirus protease2 in complex with dimer disruptor Resolution 2.00 Å

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		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	D	G	P	Q	I	D	F	S	A	D	M	E	R	Q	K	M	S	A	E	G	L	M	G	P	F	A	L	N	D	P	A	A	G	T	T	G	P	W	Y	T	N	G	T	F	G	L	T	A	G	W	H	L	D	I	W	G	K	N	R	A	E	V	T	A	R
Query Conservation
Alig confidence													.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.
Template Sequence		H	T	W	L	P	G	L	S	L	S	S	.	.	.	.	.	.	I	H	P	R	E	P	S	G	P	V	F	Q	H	V	S	L	C	A	L	G	R	R	R	G	T	V	A	V	Y	G	H	D	A	E	W	V	V	S	R	F	S	S	V	S	K	S	E	R	A	H
Template Known Secondary structure					S								.	.	.	.	.	.			T	T				S		S								S	S	S		S	S	S							S	S							T		S	S	S
Template Predicted Secondary structure													.	.	.	.	.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.							.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions