Job Description P33369 Confidence 2.91% Date Thu Jan 5 11:52:09 GMT 2012 Rank 76 Aligned Residues 69 % Identity 9% Template c2npsC_ PDB info PDB header:transport protein Chain: C: PDB Molecule:vesicle transport through interaction with t- PDBTitle: crystal structure of the early endosomal snare complex Resolution 2.50 Å

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		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	A	A	L	N	T	V	L	Q	Q	I	E	K	E	Q	N	T	I	I	A	T	D	R	Q	L	Y	Q	N	G	I	T	S	S	V	E	G	V	E	T	D	I	N	A	S	K	T	R	Q	Q	L	N	D	V	A	G	K	M	K	I	I	E	A	R	L	S	A	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	L	L	D	N	T	E	R	L	E	R	S	S	R	R	L	E	A	G	Y	Q	I	A	V	E	T	E	Q	I	G	Q	E	M	L	E	N	L	S	H	D	R	E	R	I	Q	R	A	R	E	R	L	R	E	T	D	A	N	L	G	K	S	S	R	I	L	T	G	M	L
Template Known Secondary structure															T
Template Predicted Secondary structure
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions