Return to main results Retrieve Phyre Job Id

Job DescriptionP33369
Confidence10.22%DateThu Jan 5 11:52:09 GMT 2012
Rank18Aligned Residues57
% Identity12%Templatec2ky4A_
PDB info PDB header:photosynthesisChain: A: PDB Molecule:phycobilisome linker polypeptide; PDBTitle: solution nmr structure of the pbs linker domain of phycobilisome2 linker polypeptide from anabaena sp. northeast structural genomics3 consortium target nsr123e
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   213......220.........230.........240.........250.........260.........
Predicted Secondary structure 






Query SS confidence 
























































Query Sequence  NTIIATDRQLYQNGITSSVEGVETDINASKTRQQLNDVAGKMKIIEARLSALTNNQT
Query Conservation               
     
   
          
         
   
  


   
Alig confidence 
























































Template Conservation    
   


 



 







 



  

  
     
 
 


  





 
Template Sequence  QNEFSGWESKLGNGEITVKEFIEGLGYSNLYLKEFYTPYPNTKVIELGTKHFLGRAP
Template Known Secondary structure  STSS

TSSS
TSS

Template Predicted Secondary structure 















Template SS confidence 
























































   38.40.........50.........60.........70.........80.........90....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions