Job Description P0AB01 Confidence 35.65% Date Thu Jan 5 11:14:15 GMT 2012 Rank 111 Aligned Residues 69 % Identity 16% Template c3td4D_ PDB info PDB header:membrane protein,peptide binding protein Chain: D: PDB Molecule:outer membrane protein omp38; PDBTitle: crystal structure of ompa-like domain from acinetobacter baumannii in2 complex with diaminopimelate Resolution 1.79 Å

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		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.									.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.															.
Query SS confidence																																										.	.	.	.	.	.	.	.															.
Query Sequence		A	P	S	S	N	L	I	N	N	S	L	P	R	L	N	E	G	I	R	L	W	R	E	N	P	G	S	K	L	I	F	T	G	G	V	A	K	T	N	T	.	.	.	.	.	.	.	.	V	S	T	A	E	V	G	A	R	V	A	Q	S	L	.	G	V	P	R	E	Q	I	I	T	L	D	L	P	K	D
Query Conservation																																										.	.	.	.	.	.	.	.															.
Alig confidence																																										.	.	.	.	.	.	.	.															.
Template Conservation
Template Sequence		T	N	K	S	N	I	K	D	Q	Y	K	P	E	I	A	K	V	A	E	K	L	S	E	Y	P	N	A	T	A	R	I	E	G	H	T	D	N	T	G	P	R	K	L	N	E	R	L	S	L	A	R	A	N	S	V	K	S	A	L	V	N	E	Y	N	V	D	A	S	R	L	S	T	Q	G	F	A	W	D
Template Known Secondary structure		T	T						G	G	G														S	T	T											S		S																							T	T				G	G	G							T	T	S
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions