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Job DescriptionP0AB01
Confidence29.88%DateThu Jan 5 11:14:15 GMT 2012
Rank130Aligned Residues114
% Identity11%Templatec3hs3A_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:ribose operon repressor; PDBTitle: crystal structure of periplasmic binding ribose operon2 repressor protein from lactobacillus acidophilus
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8990.........100.........110.........120.........130.........140.........150.........160........
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Query Sequence  YTWNPQWAPSSNLINNSLPRLNEGIRLWRENPGSKLIFTGGVAKTNTVSTAEVGARVAQSLGVPREQIITLDLPKDTEEE
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Template Sequence  YDSANINDDIVRIVSNNTKGGKESIKLLSKKIEKVLIQHWPLSLPTIRERIEAMTAEASKLKIDY. . LLEETPENNPYIS
Template Known Secondary structure  S




SSS
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   140.........150.........160.........170.........180.........190.........200.... .....210.......
 
   169170.........180.........190.........200....
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Query Sequence  AAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNP
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Template Sequence  AQSALNKSNQFDAIITVNDLYAAEIIKEAKRRNLKI
Template Known Secondary structure  TGGG
S
SSTT

T
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   218.220.........230.........240.........250...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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