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Job Description | P0AB01 | Confidence | 29.88% | Date | Thu Jan 5 11:14:15 GMT 2012 |
Rank | 130 | Aligned Residues | 114 |
% Identity | 11% | Template | c3hs3A_ |
PDB info |
PDB header:transcription regulator | Chain: A: PDB Molecule:ribose operon repressor; |
PDBTitle: crystal structure of periplasmic binding ribose operon2 repressor protein from lactobacillus acidophilus
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Resolution | 1.60 Å |
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89 | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
Y | T | W | N | P | Q | W | A | P | S | S | N | L | I | N | N | S | L | P | R | L | N | E | G | I | R | L | W | R | E | N | P | G | S | K | L | I | F | T | G | G | V | A | K | T | N | T | V | S | T | A | E | V | G | A | R | V | A | Q | S | L | G | V | P | R | E | Q | I | I | T | L | D | L | P | K | D | T | E | E | E |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
Y | D | S | A | N | I | N | D | D | I | V | R | I | V | S | N | N | T | K | G | G | K | E | S | I | K | L | L | S | K | K | I | E | K | V | L | I | Q | H | W | P | L | S | L | P | T | I | R | E | R | I | E | A | M | T | A | E | A | S | K | L | K | I | D | Y | . |
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L | L | E | E | T | P | E | N | N | P | Y | I | S |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | |
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169 | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
A | A | A | V | K | Q | A | I | G | D | A | P | F | L | L | V | T | S | A | S | H | L | P | R | A | M | I | F | F | Q | Q | E | G | L | N | P |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
A | Q | S | A | L | N | K | S | N | Q | F | D | A | I | I | T | V | N | D | L | Y | A | A | E | I | I | K | E | A | K | R | R | N | L | K | I |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | G | G | G |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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218 | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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