Job Description P0AB01 Confidence 99.94% Date Thu Jan 5 11:14:15 GMT 2012 Rank 1 Aligned Residues 133 % Identity 20% Template c3ca8B_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:protein ydcf; PDBTitle: crystal structure of escherichia coli ydcf, an s-adenosyl-l-methionine2 utilizing enzyme Resolution 1.80 Å

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		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.	.	.
Query Sequence		D	R	L	L	R	P	I	E	S	T	Y	P	T	W	N	N	S	Q	K	V	D	Y	I	V	V	L	G	G	G	Y	T	W	N	P	Q	W	A	P	S	S	N	L	I	N	N	S	L	P	R	L	N	E	G	I	R	L	W	R	E	N	P	G	S	K	L	I	F	T	G	G	V	A	.	.	.	.	.	.	.	.
Query Conservation																																																																										.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.									.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		N	V	I	G	Q	W	L	A	Q	D	D	F	S	G	E	V	P	Y	Q	A	D	C	V	I	L	A	G	N	A	V	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	T	I	D	A	A	C	K	I	A	R	D	Q	Q	I	P	.	L	L	I	S	G	G	I	G	H	S	T	T	F	L	Y	S
Template Known Secondary structure												T	T	T	T	T						S								S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T			.							S	S	T	T
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.																	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
													132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.						180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																			.																															.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																			.																															.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	K	T	N	T	V	S	T	A	E	V	G	A	R	V	A	Q	S	L	.	G	V	P	R	E	Q	I	I	T	L	D	L	P	K	D	T	E	E	E	A	A	A	V	K	Q	A	I	G	D	A	.	.	.	.	.	P	F	L	L	V	T	S	A	S	H	L	P	R	A	M
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																			.																															.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																			.																															.	.	.	.	.
Template Conservation
Template Sequence		A	I	A	Q	H	P	H	Y	N	T	I	R	T	T	G	R	A	E	A	T	I	L	A	D	I	A	H	Q	F	W	H	I	P	H	E	K	I	W	I	E	D	Q	S	T	N	C	G	E	N	A	R	F	S	I	A	L	L	N	Q	A	V	E	R	V	H	T	A	I	V	V	Q	D	P	T	M	Q	R	R	T	M
Template Known Secondary structure					T		T	T	G	G	G	S			T	T	S													T	T				G	G	G									S														T		S	S			S								G	G	G
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	F	F	Q	Q	E	G	L	N	P	L	P	A	P	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	T	F	R	R	M	T	G	D	N	P	D	A	P	R
Template Known Secondary structure											B	T	T	B		S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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